RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PSMG3-AS1Q96PY0 264 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 TNFRSF6BO95407 300 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 ASIPP42127 132 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 UBE2E2Q96LR5 201 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 C20orf202A1L168 122 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 TCF21O43680 179 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 FSHBP01225 129 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 K7EMT4 169 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 IGLL1P15814 213 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 F5H697 171 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 BRI3O95415 125 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 PCP4P48539 62 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
TCOF1-203ENST00000394269 DNAJC9-AS1A6NH13 148 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 NPSP0C0P6 89 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 LEPP41159 167 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 JPT2Q9H910 190 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 M0R143 59 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 PRM2P04554 102 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 TRAV9-2A0A087WT02 112 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 A0A087WWL8 130 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
TCOF1-203ENST00000394269 DEFB131AP59861 70 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
TCOF1-203ENST00000394269 Q6ZSV7 163 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 OR1N2Q8NGR9 330 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 DYNLRB2Q8TF09 96 aa8.35□□□□□ -1.07
TCOF1-203ENST00000394269 ZNF25P17030 456 aaPredicted RBP8.34□□□□□ -1.07
TCOF1-203ENST00000394269 DLX4Q92988 240 aaPredicted RBP8.34□□□□□ -1.07
TCOF1-203ENST00000394269 C20orf144Q9BQM9 153 aa8.34□□□□□ -1.07
TCOF1-203ENST00000394269 PRSS1P07477 247 aa8.34□□□□□ -1.07
TCOF1-203ENST00000394269 Q6ZVH6 145 aa8.34□□□□□ -1.07
TCOF1-203ENST00000394269 ZNF747Q9BV97 191 aa8.34□□□□□ -1.07
TCOF1-203ENST00000394269 ESM1Q9NQ30 184 aa8.34□□□□□ -1.07
TCOF1-203ENST00000394269 NACAE9PAV3 2078 aa8.34□□□□□ -1.08
TCOF1-203ENST00000394269 CACNG7P62955 275 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 OR2K2Q8NGT1 345 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 LINC01619G3V211 115 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 IGLC3P0DOY3 106 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 APRG1Q8IVJ8 170 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 TMEM208Q9BTX3 173 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 UQCR10Q9UDW1 63 aa8.33□□□□□ -1.08
TCOF1-203ENST00000394269 HBDP02042 147 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 SMIM17P0DL12 118 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 HINT1P49773 126 aaPredicted RBP8.32□□□□□ -1.08
TCOF1-203ENST00000394269 TMEM61Q8N0U2 210 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
TCOF1-203ENST00000394269 ZNF580Q9UK33 172 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 LENEPQ9Y5L5 61 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 A0A096LNJ9 63 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 STPG4Q8N801 248 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 U3KQK5 164 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 PPBPP02775 128 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 ADAMTSL5Q6ZMM2 481 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 TMEM158Q8WZ71 300 aa8.32□□□□□ -1.08
TCOF1-203ENST00000394269 FBN1P35555 2871 aaKnown RBP8.32□□□□□ -1.08
TCOF1-203ENST00000394269 K7EQG2 157 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 A0A0J9YX75 114 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 CD28P10747 220 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
TCOF1-203ENST00000394269 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 IGHV3OR16-12A0A075B7B8 117 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 GOLT1BQ9Y3E0 138 aa8.31□□□□□ -1.08
TCOF1-203ENST00000394269 PET117Q6UWS5 81 aa8.3□□□□□ -1.08
TCOF1-203ENST00000394269 C7orf71A4D174 169 aa8.3□□□□□ -1.08
TCOF1-203ENST00000394269 INAFM1C9JVW0 142 aa8.3□□□□□ -1.08
TCOF1-203ENST00000394269 NUDT3O95989 172 aa8.3□□□□□ -1.08
TCOF1-203ENST00000394269 CDKN1BP46527 198 aa8.3□□□□□ -1.08
TCOF1-203ENST00000394269 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 Q8N1Y9 231 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
TCOF1-203ENST00000394269 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 CBY3A6NI87 242 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 CD300EQ496F6 205 aaPredicted RBP8.29□□□□□ -1.08
TCOF1-203ENST00000394269 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
TCOF1-203ENST00000394269 PEMTQ9UBM1 199 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 NSUN5P1Q3KNT7 163 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
TCOF1-203ENST00000394269 TSPOP30536 169 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 MUC4Q99102 2169 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 KLLNB2CW77 178 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 LGALS9O00182 355 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 DLEU1O43261 78 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 AP1S3Q96PC3 154 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 FOXC2Q99958 501 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 NMUP48645 174 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 MYOZ3Q8TDC0 251 aa8.28□□□□□ -1.08
TCOF1-203ENST00000394269 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms