RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 IGHV4-59P01825 116 aa14.8□□□□□ -0.04
RCCD1-201ENST00000394258 S100A4P26447 101 aaKnown RBP14.8□□□□□ -0.04
RCCD1-201ENST00000394258 Q8N8P6 123 aa14.8□□□□□ -0.04
RCCD1-201ENST00000394258 PRB1P04280 392 aa14.79□□□□□ -0.04
RCCD1-201ENST00000394258 LINC00477Q96M19 166 aa14.79□□□□□ -0.04
RCCD1-201ENST00000394258 FBN2P35556 2912 aa14.79□□□□□ -0.04
RCCD1-201ENST00000394258 ABCA12Q86UK0 2595 aa14.79□□□□□ -0.04
RCCD1-201ENST00000394258 HHLA3Q9XRX5 114 aa14.79□□□□□ -0.04
RCCD1-201ENST00000394258 SMIM17P0DL12 118 aa14.78□□□□□ -0.04
RCCD1-201ENST00000394258 GTSCR1Q86UQ5 136 aa14.78□□□□□ -0.04
RCCD1-201ENST00000394258 GNRH2O43555 120 aa14.78□□□□□ -0.04
RCCD1-201ENST00000394258 IGLV1-40P01703 118 aa14.78□□□□□ -0.04
RCCD1-201ENST00000394258 ANXA2RQ3ZCQ2 193 aa14.78□□□□□ -0.04
RCCD1-201ENST00000394258 H3BUA1 57 aa14.77□□□□□ -0.04
RCCD1-201ENST00000394258 OVOL1O14753 267 aa14.77□□□□□ -0.04
RCCD1-201ENST00000394258 SMIM13P0DJ93 91 aa14.77□□□□□ -0.04
RCCD1-201ENST00000394258 DEFB112Q30KQ8 113 aa14.77□□□□□ -0.04
RCCD1-201ENST00000394258 DAZ1Q9NQZ3 744 aaKnown RBP14.77□□□□□ -0.04
RCCD1-201ENST00000394258 OR9G4Q8NGQ1 327 aa14.77□□□□□ -0.05
RCCD1-201ENST00000394258 TRAV21A0A0B4J279 112 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 C14orf178Q8N769 122 aaPredicted RBP14.76□□□□□ -0.05
RCCD1-201ENST00000394258 WFDC2Q14508 124 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 OR5A1Q8NGJ0 315 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 CLUHP3Q96NS8 147 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 ZMAT4Q9H898 229 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 TMEM160Q9NX00 188 aa14.76□□□□□ -0.05
RCCD1-201ENST00000394258 TSSC4Q9Y5U2 329 aaPredicted RBP14.76□□□□□ -0.05
RCCD1-201ENST00000394258 AGRNO00468 2067 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 NHP2Q9NX24 153 aaKnown RBP14.75□□□□□ -0.05
RCCD1-201ENST00000394258 PHLDA3Q9Y5J5 127 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 LENEPQ9Y5L5 61 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 IGKCP01834 107 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 MXRA5Q9NR99 2828 aa14.75□□□□□ -0.05
RCCD1-201ENST00000394258 USP24Q9UPU5 2620 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 LAGE3Q14657 143 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 SH2D6Q7Z4S9 175 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 SMPXQ9UHP9 88 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 TGFAP01135 160 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 ZC2HC1BQ5TFG8 222 aa14.74□□□□□ -0.05
RCCD1-201ENST00000394258 MRPL35Q9NZE8 188 aaKnown RBP14.74□□□□□ -0.05
RCCD1-201ENST00000394258 IGHV4-4A0A075B6R2 117 aa14.73□□□□□ -0.05
RCCD1-201ENST00000394258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.73□□□□□ -0.05
RCCD1-201ENST00000394258 ASIPP42127 132 aa14.73□□□□□ -0.05
RCCD1-201ENST00000394258 MGPP08493 103 aa14.73□□□□□ -0.05
RCCD1-201ENST00000394258 CFHR3Q02985 330 aa14.73□□□□□ -0.05
RCCD1-201ENST00000394258 AMTNQ6UX39 209 aa14.73□□□□□ -0.05
RCCD1-201ENST00000394258 RPL39LQ96EH5 51 aaKnown RBP14.73□□□□□ -0.05
RCCD1-201ENST00000394258 TLN2Q9Y4G6 2542 aa14.72□□□□□ -0.05
RCCD1-201ENST00000394258 BRI3O95415 125 aa14.72□□□□□ -0.05
RCCD1-201ENST00000394258 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
RCCD1-201ENST00000394258 SIGMAR1Q99720 223 aa14.72□□□□□ -0.05
RCCD1-201ENST00000394258 NAV2Q8IVL1 2488 aa14.72□□□□□ -0.05
RCCD1-201ENST00000394258 MUC4Q99102 2169 aa14.71□□□□□ -0.05
RCCD1-201ENST00000394258 IGKV3-20P01619 116 aa14.71□□□□□ -0.05
RCCD1-201ENST00000394258 MYOZ3Q8TDC0 251 aa14.71□□□□□ -0.05
RCCD1-201ENST00000394258 SIVA1O15304 175 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 DPM2O94777 84 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 H3BMG7 143 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 ETDBQ3ZM63 59 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 RASL10AQ92737 203 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 CHAC1Q9BUX1 264 aa14.7□□□□□ -0.06
RCCD1-201ENST00000394258 PSMB8P28062 276 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 TMEM238LA0A1B0GVL6 79 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 RNASE3P12724 160 aaKnown RBP14.69□□□□□ -0.06
RCCD1-201ENST00000394258 SRSF1Q07955 248 aaKnown RBP eCLIP14.69□□□□□ -0.062e-7■■■■□ 26.1
RCCD1-201ENST00000394258 LINC01356Q8N9X3 169 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 FAM19A4Q96LR4 140 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 TEX15Q9BXT5 2789 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 MYO9AB2RTY4 2548 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 GAGE12HA6NDE8 117 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 ATP5LO75964 103 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 ZNF688P0C7X2 276 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 MAPKAPK5-AS1Q8N8E1 139 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 SMIM2Q9BVW6 85 aa14.69□□□□□ -0.06
RCCD1-201ENST00000394258 INSL3P51460 131 aa14.68□□□□□ -0.06
RCCD1-201ENST00000394258 MRAP2Q96G30 205 aa14.68□□□□□ -0.06
RCCD1-201ENST00000394258 DPH3P1Q9H4G8 78 aa14.68□□□□□ -0.06
RCCD1-201ENST00000394258 TRBV25-1A0A075B6N4 114 aa14.67□□□□□ -0.06
RCCD1-201ENST00000394258 DCANP1Q8TF63 244 aa14.67□□□□□ -0.06
RCCD1-201ENST00000394258 TRAV12-3A0A0B4J271 114 aa14.67□□□□□ -0.06
RCCD1-201ENST00000394258 RNF223E7ERA6 249 aa14.67□□□□□ -0.06
RCCD1-201ENST00000394258 SUMO2P61956 95 aaKnown RBP14.67□□□□□ -0.06
RCCD1-201ENST00000394258 JPT2Q9H910 190 aa14.67□□□□□ -0.06
RCCD1-201ENST00000394258 GATA3P23771 443 aa14.66□□□□□ -0.06
RCCD1-201ENST00000394258 PSMG4Q5JS54 123 aa14.66□□□□□ -0.06
RCCD1-201ENST00000394258 SLC25A16P16260 332 aa14.66□□□□□ -0.06
RCCD1-201ENST00000394258 DSCR9P59020 149 aa14.66□□□□□ -0.06
RCCD1-201ENST00000394258 PHLDA1Q8WV24 401 aaPredicted RBP14.66□□□□□ -0.06
RCCD1-201ENST00000394258 TRAV12-2A0A075B6T6 113 aa14.65□□□□□ -0.06
RCCD1-201ENST00000394258 A0A087WX48 190 aa14.65□□□□□ -0.06
RCCD1-201ENST00000394258 ID1P41134 155 aa14.65□□□□□ -0.06
RCCD1-201ENST00000394258 SYNJ2BPP57105 145 aa14.65□□□□□ -0.06
RCCD1-201ENST00000394258 CD300EQ496F6 205 aaPredicted RBP14.65□□□□□ -0.06
RCCD1-201ENST00000394258 SPAG8Q99932 426 aaPredicted RBP14.65□□□□□ -0.06
RCCD1-201ENST00000394258 SPANXB1Q9NS25 103 aaPredicted RBP14.65□□□□□ -0.06
RCCD1-201ENST00000394258 FAM159AQ6UWV7 190 aa14.64□□□□□ -0.07
RCCD1-201ENST00000394258 K7EMT4 169 aa14.64□□□□□ -0.07
RCCD1-201ENST00000394258 CD7P09564 240 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms