RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 OR4C46A6NHA9 309 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 DMRTA1Q5VZB9 504 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 CYSRT1A8MQ03 144 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 GATA1P15976 413 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-203ENST00000394181 PRELID3AQ96N28 172 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 SCRT2Q9NQ03 307 aa14.06□□□□□ -0.16
CLDND1-203ENST00000394181 LOC389332A0A1B0GUA5 103 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 CRXO43186 299 aaPredicted RBP14.05□□□□□ -0.16
CLDND1-203ENST00000394181 HSBP1O75506 76 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 CD7P09564 240 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 CKS2P33552 79 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 LINC00614P0C842 121 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 NDUFA11Q86Y39 141 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 ORMDL3Q8N138 153 aa14.05□□□□□ -0.16
CLDND1-203ENST00000394181 BAHCC1Q9P281 2608 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 TRAV25A0A0B4J276 109 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 NPYP01303 97 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 PRM2P04554 102 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 TSPOP30536 169 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-203ENST00000394181 MDFICQ9P1T7 246 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 PHLDA3Q9Y5J5 127 aa14.04□□□□□ -0.16
CLDND1-203ENST00000394181 A8MTW9 85 aa14.03□□□□□ -0.16
CLDND1-203ENST00000394181 CACNG7P62955 275 aa14.03□□□□□ -0.16
CLDND1-203ENST00000394181 TRAV26-2A0A0B4J265 109 aa14.03□□□□□ -0.16
CLDND1-203ENST00000394181 IFI27P40305 119 aaPredicted RBP14.03□□□□□ -0.16
CLDND1-203ENST00000394181 DNLZQ5SXM8 178 aa14.03□□□□□ -0.16
CLDND1-203ENST00000394181 SPATA3Q8NHX4 192 aa14.03□□□□□ -0.16
CLDND1-203ENST00000394181 TDRG1Q3Y452 100 aa14.02□□□□□ -0.16
CLDND1-203ENST00000394181 Q8N1Y9 231 aa14.02□□□□□ -0.16
CLDND1-203ENST00000394181 MUC4Q99102 2169 aa14.02□□□□□ -0.16
CLDND1-203ENST00000394181 ATRQ13535 2644 aa14.01□□□□□ -0.17
CLDND1-203ENST00000394181 SCGB1D1O95968 90 aa14.01□□□□□ -0.17
CLDND1-203ENST00000394181 IGLV1-51P01701 117 aa14.01□□□□□ -0.17
CLDND1-203ENST00000394181 C14orf178Q8N769 122 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-203ENST00000394181 IGHV1OR15-1A0A075B7D0 117 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 IGHV3-16A0A0C4DH30 117 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 IGHV1-24A0A0C4DH33 117 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 TEP1Q99973 2627 aaKnown RBP14□□□□□ -0.17
CLDND1-203ENST00000394181 MED14OSP0DP75 135 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 HTN1P15515 57 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 KRTDAPP60985 99 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 PRSS3P2Q8NHM4 247 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 CHCHD1Q96BP2 118 aaKnown RBP14□□□□□ -0.17
CLDND1-203ENST00000394181 JPT2Q9H910 190 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 TRRAPQ9Y4A5 3859 aa14□□□□□ -0.17
CLDND1-203ENST00000394181 LINC00173Q6ZV60 143 aa13.99□□□□□ -0.17
CLDND1-203ENST00000394181 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
CLDND1-203ENST00000394181 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
CLDND1-203ENST00000394181 SMIM15Q7Z3B0 74 aa13.99□□□□□ -0.17
CLDND1-203ENST00000394181 LINC00482Q8N8I6 264 aa13.99□□□□□ -0.17
CLDND1-203ENST00000394181 OR11H12B2RN74 326 aa13.98□□□□□ -0.17
CLDND1-203ENST00000394181 PF4P02776 101 aa13.98□□□□□ -0.17
CLDND1-203ENST00000394181 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
CLDND1-203ENST00000394181 C3orf79P0CE67 100 aa13.97□□□□□ -0.17
CLDND1-203ENST00000394181 Q8N976 141 aa13.97□□□□□ -0.17
CLDND1-203ENST00000394181 C9orf85Q96MD7 179 aa13.97□□□□□ -0.17
CLDND1-203ENST00000394181 NXPH4O95158 308 aa13.96□□□□□ -0.17
CLDND1-203ENST00000394181 FA2HQ7L5A8 372 aa13.96□□□□□ -0.18
CLDND1-203ENST00000394181 NRACQ8N912 160 aa13.96□□□□□ -0.18
CLDND1-203ENST00000394181 AP5S1Q9NUS5 200 aa13.96□□□□□ -0.18
CLDND1-203ENST00000394181 CBY3A6NI87 242 aa13.95□□□□□ -0.18
CLDND1-203ENST00000394181 PPBPP02775 128 aa13.95□□□□□ -0.18
CLDND1-203ENST00000394181 STHQ8IWL8 128 aa13.95□□□□□ -0.18
CLDND1-203ENST00000394181 OR2K2Q8NGT1 345 aa13.95□□□□□ -0.18
CLDND1-203ENST00000394181 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
CLDND1-203ENST00000394181 BEAN1Q3B7T3 259 aa13.94□□□□□ -0.18
CLDND1-203ENST00000394181 TRPT1Q86TN4 253 aaKnown RBP13.94□□□□□ -0.18
CLDND1-203ENST00000394181 C19orf73Q9NVV2 129 aa13.94□□□□□ -0.18
CLDND1-203ENST00000394181 KIF25-AS1Q9Y6Z4 181 aa13.94□□□□□ -0.18
CLDND1-203ENST00000394181 A0A087WWL8 130 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 A0A096LNJ9 63 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 MGPP08493 103 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 LINC00315P59091 139 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 SPATA12Q7Z6I5 190 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 DPH3P1Q9H4G8 78 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 FBN1P35555 2871 aaKnown RBP13.93□□□□□ -0.18
CLDND1-203ENST00000394181 PRO1933Q9H354 126 aa13.93□□□□□ -0.18
CLDND1-203ENST00000394181 NOTCH3Q9UM47 2321 aa13.92□□□□□ -0.18
CLDND1-203ENST00000394181 AP1S3Q96PC3 154 aa13.92□□□□□ -0.18
CLDND1-203ENST00000394181 CITED1Q99966 193 aa13.92□□□□□ -0.18
CLDND1-203ENST00000394181 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
CLDND1-203ENST00000394181 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
CLDND1-203ENST00000394181 ZNF664Q8N3J9 261 aa13.91□□□□□ -0.18
CLDND1-203ENST00000394181 RASL10AQ92737 203 aa13.91□□□□□ -0.18
CLDND1-203ENST00000394181 RPL39LQ96EH5 51 aaKnown RBP13.91□□□□□ -0.18
CLDND1-203ENST00000394181 LINC01587Q99440 93 aa13.91□□□□□ -0.18
CLDND1-203ENST00000394181 CLUHP3Q96NS8 147 aa13.9□□□□□ -0.18
CLDND1-203ENST00000394181 MRAP2Q96G30 205 aa13.9□□□□□ -0.18
CLDND1-203ENST00000394181 LAMTOR2Q9Y2Q5 125 aa13.9□□□□□ -0.18
CLDND1-203ENST00000394181 IGLV2-18A0A075B6J9 118 aa13.89□□□□□ -0.19
CLDND1-203ENST00000394181 TRGV11A0A075B6L2 103 aa13.89□□□□□ -0.19
CLDND1-203ENST00000394181 INSP01308 110 aa13.89□□□□□ -0.19
CLDND1-203ENST00000394181 GIG44P09565 113 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-203ENST00000394181 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
CLDND1-203ENST00000394181 C1orf158Q8N1D5 194 aa13.89□□□□□ -0.19
CLDND1-203ENST00000394181 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
CLDND1-203ENST00000394181 IGHV3OR16-12A0A075B7B8 117 aa13.88□□□□□ -0.19
CLDND1-203ENST00000394181 RPL35AP18077 110 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms