RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 VWFP04275 2813 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 TRBV24-1A0A075B6N3 115 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 ZNF705DP0CH99 300 aaPredicted RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 ZNF705BP0CI00 300 aaPredicted RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 PAFAH1B2P68402 229 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 ERCC8Q13216 396 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 LCN12Q6JVE5 192 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 LYPD1Q8N2G4 141 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 DAZ1Q9NQZ3 744 aaKnown RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 IL36BQ9NZH7 164 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 C11orf21Q9P2W6 132 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 TRAV8-2A0A0B4J237 113 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 IGHV7-4-1A0A0J9YVY3 117 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 INAFM1C9JVW0 142 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 G3V4G9 280 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 LGALS1P09382 135 aaKnown RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 RPL13AP40429 203 aaKnown RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 Q8N2B8 174 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 ZC2HC1AQ96GY0 325 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 OSTCQ9NRP0 149 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 SIGLEC8Q9NYZ4 499 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 TRRAPQ9Y4A5 3859 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 FBN1P35555 2871 aaKnown RBP4.41□□□□□ -1.7
CASC3-202ENST00000394114 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 C1orf194Q5T5A4 169 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
CASC3-202ENST00000394114 HIST3H2BBQ8N257 126 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 TMEM86BQ8N661 226 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 KLHL30-AS1Q8NEE0 82 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 FRZBQ92765 325 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 UBE2E2Q96LR5 201 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 RCHY1Q96PM5 261 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 V9GYY9 64 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 TMSB15BA0A087X1C1 80 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 TMEM213A2RRL7 107 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 CBLN1P23435 193 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 AMTP48728 403 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 SUMO4Q6EEV6 95 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 GPHB5Q86YW7 130 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 TMEM183AQ8IXX5 376 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 TMEM75Q8N9X5 138 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 ZNF418Q8TF45 676 aaPredicted RBP4.41□□□□□ -1.7
CASC3-202ENST00000394114 C20orf173Q96LM9 149 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 PYGO2Q9BRQ0 406 aa4.41□□□□□ -1.7
CASC3-202ENST00000394114 KIR2DL5BA0A0G2JN68 375 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 KIR2DL5BA0A0G2JPC4 375 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 A0A1W2PS18 150 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 F6UB75 175 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BKO60814 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 P01737 135 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BJP06899 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BOP23527 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BBP33778 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BDP58876 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BCP62807 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H1AQ02539 215 aaPredicted RBP4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST2H2BEQ16778 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.4□□□□□ -1.7
CASC3-202ENST00000394114 KIR2DL5AQ8N109 375 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 STPG4Q8N801 248 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 KIR2DL5BQ8NHK3 375 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 MYOZ3Q8TDC0 251 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BHQ93079 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BNQ99877 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 HIST1H2BMQ99879 126 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 SLC50A1Q9BRV3 221 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 COX11Q9Y6N1 276 aa4.4□□□□□ -1.7
CASC3-202ENST00000394114 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 CD28P10747 220 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 CRIP1P50238 77 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.71
CASC3-202ENST00000394114 NIT1Q86X76 327 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 LINC01006Q8NI28 216 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 MRAPQ8TCY5 172 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.71
CASC3-202ENST00000394114 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
CASC3-202ENST00000394114 HIGD1CA8MV81 97 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 ZNF253O75346 499 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 ZNF80P51504 273 aaPredicted RBP4.39□□□□□ -1.71
CASC3-202ENST00000394114 HILS1P60008 231 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 FAM231DQ6ZW35 169 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 NUP35Q8NFH5 326 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 C20orf144Q9BQM9 153 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 AGPAT4-IT1Q9H0P7 198 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 RPP21Q9H633 154 aaKnown RBP4.39□□□□□ -1.71
CASC3-202ENST00000394114 RETNQ9HD89 108 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 SMIM27A0A1W2PRY6 76 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 C19orf71A6NCJ1 209 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 RPS20P60866 119 aaKnown RBP4.39□□□□□ -1.71
CASC3-202ENST00000394114 TDRG1Q3Y452 100 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 BTF3L4Q96K17 158 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms