RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 FXYD6-FXYD2A0A087WZ82 144 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 GCGP01275 180 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 RNASE3P12724 160 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 Q9HAA7 133 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
SNRPA1-202ENST00000394082 PGPEP1LA6NFU8 196 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 MBP02144 154 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 GCHFRP30047 84 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 SERF2P84101 59 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 Q5BKY6 102 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
SNRPA1-202ENST00000394082 TRAV8-3A0A0A6YYJ7 113 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 A8MWV9 139 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 IGHV3-30-3P0DP02 117 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 Q6ZSA8 131 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 CYB561D1Q8N8Q1 229 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 RAB24Q969Q5 203 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 TMEM167BQ9NRX6 74 aa11.62□□□□□ -0.55
SNRPA1-202ENST00000394082 TOR2AQ5JU69 321 aa11.61□□□□□ -0.55
SNRPA1-202ENST00000394082 FAM30AQ9NZY2 134 aa11.61□□□□□ -0.55
SNRPA1-202ENST00000394082 A0A087WWC5 75 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 IGHV3-73A0A0B4J1V6 119 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 CXorf1O96002 111 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 PARLQ9H300 379 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
SNRPA1-202ENST00000394082 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 HAMPP81172 84 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 HSD17B11Q8NBQ5 300 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 LINC00479Q96M42 142 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
SNRPA1-202ENST00000394082 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 IGKV3D-20A0A0C4DH25 116 aa11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 IL36BQ9NZH7 164 aa11.58□□□□□ -0.56
SNRPA1-202ENST00000394082 RNF222A6NCQ9 220 aa11.57□□□□□ -0.56
SNRPA1-202ENST00000394082 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
SNRPA1-202ENST00000394082 DNLZQ5SXM8 178 aa11.57□□□□□ -0.56
SNRPA1-202ENST00000394082 UFSP1Q6NVU6 142 aa11.57□□□□□ -0.56
SNRPA1-202ENST00000394082 ACTR3CQ9C0K3 210 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-202ENST00000394082 ARPC5O15511 151 aa11.56□□□□□ -0.56
SNRPA1-202ENST00000394082 SEC11BP0C7V7 166 aa11.56□□□□□ -0.56
SNRPA1-202ENST00000394082 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-202ENST00000394082 WFDC2Q14508 124 aa11.56□□□□□ -0.56
SNRPA1-202ENST00000394082 RHODO00212 210 aa11.55□□□□□ -0.56
SNRPA1-202ENST00000394082 ASIPP42127 132 aa11.55□□□□□ -0.56
SNRPA1-202ENST00000394082 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
SNRPA1-202ENST00000394082 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-202ENST00000394082 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 G3V3Q6 166 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 GAGE1Q13065 139 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 GAGE4Q13068 117 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 GAGE5Q13069 117 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 LGALSLQ3ZCW2 172 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 GAGE13Q4V321 117 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 RPL7L1Q6DKI1 246 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 DAZ4Q86SG3 579 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 Q8N3U1 123 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 RMI2Q96E14 147 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 DAZ3Q9NR90 486 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
SNRPA1-202ENST00000394082 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-202ENST00000394082 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
SNRPA1-202ENST00000394082 J3QL48 77 aa11.53□□□□□ -0.56
SNRPA1-202ENST00000394082 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
SNRPA1-202ENST00000394082 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
SNRPA1-202ENST00000394082 Q8N976 141 aa11.52□□□□□ -0.57
SNRPA1-202ENST00000394082 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
SNRPA1-202ENST00000394082 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.57
SNRPA1-202ENST00000394082 B4DEV8 164 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 NIT1Q86X76 327 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 C14orf178Q8N769 122 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 SAMD10Q9BYL1 202 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 Q9UF83 564 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 ZFP30Q9Y2G7 519 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 URGCP-MRPS24S4R325 110 aa11.51□□□□□ -0.57
SNRPA1-202ENST00000394082 TRAV34A0A0B4J273 112 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms