RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CKS2P33552 79 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 INSL3P51460 131 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1FQ15415 496 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 TDRG1Q3Y452 100 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 DNLZQ5SXM8 178 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 Q8N1Y9 231 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 OR10D4PQ8NGN7 298 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 LINC01587Q99440 93 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 XCL2Q9UBD3 114 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 VWFP04275 2813 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 IGHV4-4A0A075B6R2 117 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 NUTF2P61970 127 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 TRPT1Q86TN4 253 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 C3orf56Q8N813 242 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 TMEM18Q96B42 140 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 RCHY1Q96PM5 261 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 TMEM208Q9BTX3 173 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 SAMD10Q9BYL1 202 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 SCRT2Q9NQ03 307 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 MDFICQ9P1T7 246 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 NOTCH3Q9UM47 2321 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 TRGV11A0A075B6L2 103 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 IGHV3-16A0A0C4DH30 117 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 NCR2O95944 276 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 AMBPP02760 352 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 RAB4AP20338 218 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 DMRTA1Q5VZB9 504 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
TDP1-203ENST00000393454 GTSCR1Q86UQ5 136 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 PRIMA1Q86XR5 153 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.39
TDP1-203ENST00000393454 PRELID3AQ96N28 172 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 CLUHP3Q96NS8 147 aa6.34□□□□□ -1.39
TDP1-203ENST00000393454 IGHV3OR16-12A0A075B7B8 117 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 LINC00310P59036 64 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 NIT1Q86X76 327 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 RNF185Q96GF1 192 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 FAM110AQ9BQ89 295 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 MCRIP2Q9BUT9 160 aaKnown RBP6.34□□□□□ -1.4
TDP1-203ENST00000393454 ZNF747Q9BV97 191 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.4
TDP1-203ENST00000393454 MUC4Q99102 2169 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 LOC389332A0A1B0GUA5 103 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 PRM2P04554 102 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 PMCHP20382 165 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 C12orf54Q6X4T0 127 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 DEFB125Q8N687 156 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 C14orf178Q8N769 122 aaPredicted RBP6.33□□□□□ -1.4
TDP1-203ENST00000393454 U3KQK5 164 aa6.33□□□□□ -1.4
TDP1-203ENST00000393454 HSBP1O75506 76 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 MGPP08493 103 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 ESDP10768 282 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 IGLL1P15814 213 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 SYT8Q8NBV8 401 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 PRSS3P2Q8NHM4 247 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 AP1S3Q96PC3 154 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 C20orf144Q9BQM9 153 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 TRAV26-2A0A0B4J265 109 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 PPBPP02775 128 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 AMTP48728 403 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 DPH3P1Q9H4G8 78 aa6.32□□□□□ -1.4
TDP1-203ENST00000393454 NXPH4O95158 308 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 NPYP01303 97 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 LINC00614P0C842 121 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 GATA1P15976 413 aaPredicted RBP6.31□□□□□ -1.4
TDP1-203ENST00000393454 ZNF415Q09FC8 603 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 FA2HQ7L5A8 372 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 WFDC9Q8NEX5 89 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 JPT2Q9H910 190 aa6.31□□□□□ -1.4
TDP1-203ENST00000393454 A0A087WWL8 130 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 ZNF876PQ49A33 203 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 SHISA2Q6UWI4 295 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 C1orf158Q8N1D5 194 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 TMEM158Q8WZ71 300 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
TDP1-203ENST00000393454 URB1-AS1Q96HZ7 61 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 C12orf57Q99622 126 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 GSN-AS1Q9NRJ2 163 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
TDP1-203ENST00000393454 F5H697 171 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 IFI27P40305 119 aaPredicted RBP6.3□□□□□ -1.4
TDP1-203ENST00000393454 PMCHL1Q16048 86 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 FAM74A4Q5TZK3 123 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 MORN3Q6PF18 240 aaPredicted RBP6.3□□□□□ -1.4
TDP1-203ENST00000393454 C1QTNF4Q9BXJ3 329 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
TDP1-203ENST00000393454 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms