RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ESDP10768 282 aa12.85□□□□□ -0.35
MBD4-202ENST00000393278 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
MBD4-202ENST00000393278 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
MBD4-202ENST00000393278 AMBPP02760 352 aa12.84□□□□□ -0.35
MBD4-202ENST00000393278 IQCJQ1A5X6 159 aa12.84□□□□□ -0.35
MBD4-202ENST00000393278 Q8N1Y9 231 aa12.84□□□□□ -0.35
MBD4-202ENST00000393278 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
MBD4-202ENST00000393278 IGHV3-16A0A0C4DH30 117 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 RNF185Q96GF1 192 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 RCHY1Q96PM5 261 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 ZNF747Q9BV97 191 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 U3KQK5 164 aa12.83□□□□□ -0.35
MBD4-202ENST00000393278 M0R381 172 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 SPRY2O43597 315 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 NXPH4O95158 308 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 INSP01308 110 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 FABP4P15090 132 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
MBD4-202ENST00000393278 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
MBD4-202ENST00000393278 ATRQ13535 2644 aa12.82□□□□□ -0.36
MBD4-202ENST00000393278 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
MBD4-202ENST00000393278 D6R8Y8 96 aa12.82□□□□□ -0.36
MBD4-202ENST00000393278 RAB4AP20338 218 aa12.82□□□□□ -0.36
MBD4-202ENST00000393278 EVI2AP22794 236 aa12.82□□□□□ -0.36
MBD4-202ENST00000393278 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
MBD4-202ENST00000393278 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
MBD4-202ENST00000393278 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
MBD4-202ENST00000393278 MCRIP2Q9BUT9 160 aaKnown RBP12.81□□□□□ -0.36
MBD4-202ENST00000393278 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
MBD4-202ENST00000393278 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
MBD4-202ENST00000393278 LINC00467Q9BRT7 94 aa12.8□□□□□ -0.36
MBD4-202ENST00000393278 CBY3A6NI87 242 aa12.8□□□□□ -0.36
MBD4-202ENST00000393278 OR10D4PQ8NGN7 298 aa12.8□□□□□ -0.36
MBD4-202ENST00000393278 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
MBD4-202ENST00000393278 CKS2P33552 79 aa12.79□□□□□ -0.36
MBD4-202ENST00000393278 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
MBD4-202ENST00000393278 PRELID3AQ96N28 172 aa12.79□□□□□ -0.36
MBD4-202ENST00000393278 VWFP04275 2813 aa12.78□□□□□ -0.36
MBD4-202ENST00000393278 PPBPP02775 128 aa12.78□□□□□ -0.36
MBD4-202ENST00000393278 AP1S3Q96PC3 154 aa12.78□□□□□ -0.36
MBD4-202ENST00000393278 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
MBD4-202ENST00000393278 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.36
MBD4-202ENST00000393278 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.36
MBD4-202ENST00000393278 LINC01587Q99440 93 aa12.77□□□□□ -0.36
MBD4-202ENST00000393278 MUC4Q99102 2169 aa12.77□□□□□ -0.37
MBD4-202ENST00000393278 FBN1P35555 2871 aaKnown RBP12.77□□□□□ -0.37
MBD4-202ENST00000393278 NCR2O95944 276 aa12.77□□□□□ -0.37
MBD4-202ENST00000393278 NIT1Q86X76 327 aa12.77□□□□□ -0.37
MBD4-202ENST00000393278 C3orf56Q8N813 242 aa12.77□□□□□ -0.37
MBD4-202ENST00000393278 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.37
MBD4-202ENST00000393278 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
MBD4-202ENST00000393278 HTN1P15515 57 aa12.76□□□□□ -0.37
MBD4-202ENST00000393278 SHISA2Q6UWI4 295 aa12.76□□□□□ -0.37
MBD4-202ENST00000393278 C1orf158Q8N1D5 194 aa12.76□□□□□ -0.37
MBD4-202ENST00000393278 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
MBD4-202ENST00000393278 SAMD10Q9BYL1 202 aa12.76□□□□□ -0.37
MBD4-202ENST00000393278 WIPF1O43516 503 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 NPYP01303 97 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 IGLL1P15814 213 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
MBD4-202ENST00000393278 RNASEKQ6P5S7 137 aaKnown RBP12.75□□□□□ -0.37
MBD4-202ENST00000393278 MORN3Q6PF18 240 aaPredicted RBP12.75□□□□□ -0.37
MBD4-202ENST00000393278 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
MBD4-202ENST00000393278 SYT8Q8NBV8 401 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 CHCHD1Q96BP2 118 aaKnown RBP12.75□□□□□ -0.37
MBD4-202ENST00000393278 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
MBD4-202ENST00000393278 LINC00614P0C842 121 aa12.74□□□□□ -0.37
MBD4-202ENST00000393278 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
MBD4-202ENST00000393278 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
MBD4-202ENST00000393278 HSBP1O75506 76 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 GAS8-AS1O95177 125 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 PRM2P04554 102 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 SMIM6P0DI80 62 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 AMTP48728 403 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 PMCHP20382 165 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 C1QTNF4Q9BXJ3 329 aa12.73□□□□□ -0.37
MBD4-202ENST00000393278 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
MBD4-202ENST00000393278 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
MBD4-202ENST00000393278 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
MBD4-202ENST00000393278 JPT2Q9H910 190 aa12.72□□□□□ -0.37
MBD4-202ENST00000393278 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
MBD4-202ENST00000393278 LINC00315P59091 139 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 PRSS3P2Q8NHM4 247 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 GSN-AS1Q9NRJ2 163 aa12.71□□□□□ -0.37
MBD4-202ENST00000393278 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 LOC389332A0A1B0GUA5 103 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 MGPP08493 103 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms