RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
LCA5-202ENST00000392959 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 GTSF1Q8WW33 167 aa10.24□□□□□ -0.77
LCA5-202ENST00000392959 IGKV1OR2-108A0A075B7D4 117 aa10.24□□□□□ -0.77
LCA5-202ENST00000392959 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
LCA5-202ENST00000392959 DKK4Q9UBT3 224 aa10.24□□□□□ -0.77
LCA5-202ENST00000392959 WT1P19544 449 aaPredicted RBP10.24□□□□□ -0.77
LCA5-202ENST00000392959 Q9H8V8 135 aa10.24□□□□□ -0.77
LCA5-202ENST00000392959 KMT2EQ8IZD2 1858 aa10.24□□□□□ -0.77
LCA5-202ENST00000392959 PRR14LQ5THK1 2151 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 NKAPP1Q8N9T2 125 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 Q96MF0 132 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 BUB3O43684 328 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 PIP4P1Q86T03 277 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 NPBQ8NG41 125 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 RITA1Q96K30 269 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 IGHG4P01861 327 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 CRYBA4P53673 196 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 IGFBPL1Q8WX77 278 aa10.23□□□□□ -0.77
LCA5-202ENST00000392959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
LCA5-202ENST00000392959 IGKV2-29A2NJV5 120 aaPredicted RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 GRNP28799 593 aaKnown RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 U3KQE9 123 aa10.22□□□□□ -0.77
LCA5-202ENST00000392959 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
LCA5-202ENST00000392959 TRAV25A0A0B4J276 109 aa10.22□□□□□ -0.77
LCA5-202ENST00000392959 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
LCA5-202ENST00000392959 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 IGLV2-14P01704 120 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 DSCR8Q96T75 97 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 A0A0J9YXV3 536 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 FRMD6-AS1P0C7T7 363 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.77
LCA5-202ENST00000392959 IGHV4-59P01825 116 aa10.21□□□□□ -0.78
LCA5-202ENST00000392959 FXYD2P54710 66 aa10.21□□□□□ -0.78
LCA5-202ENST00000392959 DEFB112Q30KQ8 113 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 SUMO4Q6EEV6 95 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 ZFP2Q6ZN57 461 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 C11orf1Q9H5F2 150 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 A0A096LPF7 62 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
LCA5-202ENST00000392959 A4D1N5 150 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 RNASE8Q8TDE3 154 aaKnown RBP10.19□□□□□ -0.78
LCA5-202ENST00000392959 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
LCA5-202ENST00000392959 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 AJUBAQ96IF1 538 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
LCA5-202ENST00000392959 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 TRACP01848 142 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 APOC4P55056 127 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
LCA5-202ENST00000392959 CRYGCP07315 174 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 XCL1P47992 114 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 PRAC2D3DTV9 90 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 RS1O15537 224 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 IGLV1-47P01700 117 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 HERV-K104P63124 156 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 C16orf54Q6UWD8 224 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 Q8N9W7 124 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 E7EUB6 86 aa10.18□□□□□ -0.78
LCA5-202ENST00000392959 B5MCH6 92 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 TEX22C9J3V5 150 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 BLCAPP62952 87 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 WI2-2373I1.2A0A1W2PRP0 233 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 WFDC2Q14508 124 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 ODF3L1Q8IXM7 274 aa10.17□□□□□ -0.78
LCA5-202ENST00000392959 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 DSCAML1Q8TD84 2053 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 PLXNB3Q9ULL4 1909 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 CTRLP40313 264 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 IGHV4-61A0A0C4DH41 118 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 ACYP1P07311 99 aa10.16□□□□□ -0.78
LCA5-202ENST00000392959 ORMDL1Q9P0S3 153 aa10.15□□□□□ -0.78
LCA5-202ENST00000392959 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
LCA5-202ENST00000392959 TANC1Q9C0D5 1861 aa10.15□□□□□ -0.78
LCA5-202ENST00000392959 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.79
LCA5-202ENST00000392959 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.79
LCA5-202ENST00000392959 OTOGLQ3ZCN5 2332 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 P0C879 139 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 NCKAP5O14513 1909 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 E9PLD3 99 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
LCA5-202ENST00000392959 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms