RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GATA4P43694 442 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 CR1LQ2VPA4 569 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 FOXE3Q13461 319 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 Q0VFX4 171 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
CCDC50-201ENST00000392455 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
CCDC50-201ENST00000392455 C3orf22Q8N5N4 141 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 NDUFA4L2Q9NRX3 87 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 WFDC11Q8NEX6 87 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 K7EM74 188 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 EXPH5Q8NEV8 1989 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 UNQ6494/PRO21346Q6UXR6 183 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 HIST2H2BCQ6DN03 193 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 C20orf173Q96LM9 149 aa11.73□□□□□ -0.53
CCDC50-201ENST00000392455 TRBV10-2A0A0K0K1G8 114 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 PRSS57Q6UWY2 283 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 LY6HO94772 140 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 EFNA2O43921 213 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 CYTL1Q9NRR1 136 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 COL8A2P25067 703 aa11.72□□□□□ -0.53
CCDC50-201ENST00000392455 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 H3BRN7 92 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 UQCRQO14949 82 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 IGHV1-69P01742 117 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 LINC00643Q86TS7 51 aa11.71□□□□□ -0.53
CCDC50-201ENST00000392455 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.54
CCDC50-201ENST00000392455 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.54
CCDC50-201ENST00000392455 HIGD1BQ9P298 99 aa11.71□□□□□ -0.54
CCDC50-201ENST00000392455 NDUFS7O75251 213 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 CFHR3Q02985 330 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 CRYGBP07316 175 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 CCL25O15444 150 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 Q6ZUT4 128 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 ZNF833PQ6ZTB9 187 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 RUSC1-AS1Q66K80 236 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
CCDC50-201ENST00000392455 VOPP1Q96AW1 172 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 TMEM213A2RRL7 107 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 LINC00473A8K010 186 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 C5orf24Q7Z6I8 188 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 SEM1Q6ZVN7 128 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 Q6P435 159 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 LINC00205P59089 165 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 Q8N1Y9 231 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 ABCA2Q9BZC7 2435 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 BPY2O14599 106 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 IGHV2-70P01814 119 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 FGF23Q9GZV9 251 aaPredicted RBP11.69□□□□□ -0.54
CCDC50-201ENST00000392455 PNRC2Q9NPJ4 139 aaKnown RBP11.69□□□□□ -0.54
CCDC50-201ENST00000392455 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
CCDC50-201ENST00000392455 IGLL1P15814 213 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 RNF185Q96GF1 192 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
CCDC50-201ENST00000392455 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
CCDC50-201ENST00000392455 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
CCDC50-201ENST00000392455 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
CCDC50-201ENST00000392455 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 K7EQD1 137 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 LGALS9O00182 355 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 MST1P26927 711 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 V9GYV3 84 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
CCDC50-201ENST00000392455 ATP6V0E1O15342 81 aa11.68□□□□□ -0.54
CCDC50-201ENST00000392455 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
CCDC50-201ENST00000392455 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
CCDC50-201ENST00000392455 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
CCDC50-201ENST00000392455 Q8TCH9 128 aa11.67□□□□□ -0.54
CCDC50-201ENST00000392455 K7ERJ3 54 aa11.66□□□□□ -0.54
CCDC50-201ENST00000392455 TANC1Q9C0D5 1861 aa11.66□□□□□ -0.54
CCDC50-201ENST00000392455 FAM236DA0A1B0GTK5 79 aa11.66□□□□□ -0.54
CCDC50-201ENST00000392455 FAM236CP0DP71 79 aa11.66□□□□□ -0.54
CCDC50-201ENST00000392455 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 LTBP1Q14766 1721 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 LMO1P25800 156 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 HIVEP2P31629 2446 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 FANCD2OSQ96PS1 177 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 E7EQL1 145 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
CCDC50-201ENST00000392455 IGKV3D-7A0A0C4DH55 119 aa11.65□□□□□ -0.54
CCDC50-201ENST00000392455 SP5Q6BEB4 398 aaPredicted RBP11.65□□□□□ -0.54
CCDC50-201ENST00000392455 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.55
CCDC50-201ENST00000392455 DKK2Q9UBU2 259 aa11.65□□□□□ -0.55
CCDC50-201ENST00000392455 NPSP0C0P6 89 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms