RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 KLHL30-AS1Q8NEE0 82 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 NXT2Q9NPJ8 142 aaKnown RBP13.82□□□□□ -0.2
STRADB-202ENST00000392249 MTORP42345 2549 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 TRAV12-2A0A075B6T6 113 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 A0A1B0GV90 55 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 MED14OSP0DP75 135 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 Q6ZN92 141 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 YAE1D1Q9NRH1 226 aa13.82□□□□□ -0.2
STRADB-202ENST00000392249 GCN1Q92616 2671 aaKnown RBP13.82□□□□□ -0.2
STRADB-202ENST00000392249 C7orf71A4D174 169 aa13.81□□□□□ -0.2
STRADB-202ENST00000392249 LEPP41159 167 aa13.81□□□□□ -0.2
STRADB-202ENST00000392249 C14orf178Q8N769 122 aaPredicted RBP13.81□□□□□ -0.2
STRADB-202ENST00000392249 OR1N2Q8NGR9 330 aa13.81□□□□□ -0.2
STRADB-202ENST00000392249 MUC4Q99102 2169 aa13.81□□□□□ -0.2
STRADB-202ENST00000392249 LINC01546A6NGU7 62 aa13.8□□□□□ -0.2
STRADB-202ENST00000392249 OR9G4Q8NGQ1 327 aa13.8□□□□□ -0.2
STRADB-202ENST00000392249 ODF3Q96PU9 254 aa13.8□□□□□ -0.2
STRADB-202ENST00000392249 FOXC2Q99958 501 aa13.8□□□□□ -0.2
STRADB-202ENST00000392249 CD5LO43866 347 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 SPINK13Q1W4C9 94 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
STRADB-202ENST00000392249 FASNP49327 2511 aaKnown RBP13.79□□□□□ -0.2
STRADB-202ENST00000392249 SETD2Q9BYW2 2564 aaPredicted RBP13.79□□□□□ -0.2
STRADB-202ENST00000392249 IGLV2-18A0A075B6J9 118 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 CD7P09564 240 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 HNRNPA3P51991 378 aaKnown RBP13.79□□□□□ -0.2
STRADB-202ENST00000392249 Q8N8P6 123 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 MRAP2Q96G30 205 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 DPH3P1Q9H4G8 78 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 PEMTQ9UBM1 199 aa13.79□□□□□ -0.2
STRADB-202ENST00000392249 HSBP1L1C9JCN9 74 aa13.78□□□□□ -0.2
STRADB-202ENST00000392249 CDKN1BP46527 198 aa13.78□□□□□ -0.2
STRADB-202ENST00000392249 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
STRADB-202ENST00000392249 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
STRADB-202ENST00000392249 C18orf15Q96N68 181 aa13.78□□□□□ -0.2
STRADB-202ENST00000392249 MGPP08493 103 aa13.77□□□□□ -0.21
STRADB-202ENST00000392249 AP1S3Q96PC3 154 aa13.77□□□□□ -0.21
STRADB-202ENST00000392249 ST20Q9HBF5 79 aa13.77□□□□□ -0.21
STRADB-202ENST00000392249 TP73-AS1Q9UF72 201 aa13.77□□□□□ -0.21
STRADB-202ENST00000392249 DUSP14O95147 198 aaKnown RBP13.76□□□□□ -0.21
STRADB-202ENST00000392249 FCER1GP30273 86 aa13.76□□□□□ -0.21
STRADB-202ENST00000392249 BATFQ16520 125 aa13.76□□□□□ -0.21
STRADB-202ENST00000392249 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
STRADB-202ENST00000392249 TMEM61Q8N0U2 210 aa13.76□□□□□ -0.21
STRADB-202ENST00000392249 TSPOP30536 169 aa13.76□□□□□ -0.21
STRADB-202ENST00000392249 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
STRADB-202ENST00000392249 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 PRSS47A8MTI9 375 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 NXPH4O95158 308 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 DEFB131AP59861 70 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 HECTD1Q9ULT8 2610 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 WNK1Q9H4A3 2382 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 A0A1W2PRX2 142 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 TCAPO15273 167 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 DEFB125Q8N687 156 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 DYNLRB2Q8TF09 96 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 RASL10AQ92737 203 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
STRADB-202ENST00000392249 AMTNQ6UX39 209 aa13.74□□□□□ -0.21
STRADB-202ENST00000392249 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
STRADB-202ENST00000392249 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
STRADB-202ENST00000392249 LGALS9BQ3B8N2 356 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 LGALS9CQ6DKI2 356 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 JPT2Q9H910 190 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 LAGE3Q14657 143 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 ZNF124Q15973 351 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 Q8N1Y9 231 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 RAX2Q96IS3 184 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 SMIM2Q9BVW6 85 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 MDFICQ9P1T7 246 aa13.73□□□□□ -0.21
STRADB-202ENST00000392249 IGHV3-16A0A0C4DH30 117 aa13.72□□□□□ -0.21
STRADB-202ENST00000392249 CD28P10747 220 aa13.72□□□□□ -0.21
STRADB-202ENST00000392249 IGHV1OR15-1A0A075B7D0 117 aa13.72□□□□□ -0.21
STRADB-202ENST00000392249 SUMO2P61956 95 aaKnown RBP13.71□□□□□ -0.21
STRADB-202ENST00000392249 SMIM17P0DL12 118 aa13.71□□□□□ -0.22
STRADB-202ENST00000392249 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.22
STRADB-202ENST00000392249 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.22
STRADB-202ENST00000392249 C9orf85Q96MD7 179 aa13.71□□□□□ -0.22
STRADB-202ENST00000392249 KIF25-AS1Q9Y6Z4 181 aa13.71□□□□□ -0.22
STRADB-202ENST00000392249 HLA-DRB4P13762 266 aa13.7□□□□□ -0.22
STRADB-202ENST00000392249 CD300EQ496F6 205 aaPredicted RBP13.7□□□□□ -0.22
STRADB-202ENST00000392249 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
STRADB-202ENST00000392249 HLA-DRB4X5D2U9 266 aa13.7□□□□□ -0.22
STRADB-202ENST00000392249 A0A087WWL8 130 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 TRAV2A0A0B4J234 112 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
STRADB-202ENST00000392249 LINC00315P59091 139 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 H3BMM0 161 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
STRADB-202ENST00000392249 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 RBMY1FQ15415 496 aaKnown RBP13.69□□□□□ -0.22
STRADB-202ENST00000392249 SLC25A34Q6PIV7 304 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 LINC01006Q8NI28 216 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
STRADB-202ENST00000392249 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
STRADB-202ENST00000392249 SMR3AQ99954 134 aa13.68□□□□□ -0.22
STRADB-202ENST00000392249 MAP6D1Q9H9H5 199 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms