RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ATAD2BQ9ULI0 1458 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 H0YJX3 145 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 COX8AP10176 69 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 ANXA8P13928 327 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 MYL12AP19105 171 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 ANXA8L1Q5VT79 327 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 COPS6Q7L5N1 327 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 CD302Q8IX05 232 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 C20orf197Q8N268 126 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 DIRC1Q969H9 104 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 SMIM19Q96E16 107 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 MSANTD3Q96H12 275 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 MAP1LC3BQ9GZQ8 125 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 NAA60Q9H7X0 242 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 RABL2BQ9UNT1 228 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 MPC1Q9Y5U8 109 aa-3.47□□□□□ -2.96
TRAJ53-201ENST00000390485 PIK3C2AO00443 1686 aa-3.47□□□□□ -2.97
TRAJ53-201ENST00000390485 PTPRGP23470 1445 aa-3.47□□□□□ -2.97
TRAJ53-201ENST00000390485 MRC1P22897 1456 aa-3.47□□□□□ -2.97
TRAJ53-201ENST00000390485 NCAPD3P42695 1498 aa-3.47□□□□□ -2.97
TRAJ53-201ENST00000390485 MAGI1Q96QZ7 1491 aaPredicted RBP-3.47□□□□□ -2.97
TRAJ53-201ENST00000390485 TMEM210A6NLX4 147 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 SYS1-DBNDD2H3BUS1 97 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 K7ERJ3 54 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 BIRC5O15392 142 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 CRHP06850 196 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 FABP4P15090 132 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 RPL12P30050 165 aaKnown RBP-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 SLAMF1Q13291 335 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 POU6F1Q14863 301 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 OR8B8Q15620 311 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 CST9Q5W186 159 aa-3.48□□□□□ -2.97
TRAJ53-201ENST00000390485 CPSF4LA6NMK7 179 aaKnown RBP-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 ARPP19P56211 112 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 NDUFA6P56556 154 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 FKBP1CQ5VVH2 108 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 CT55Q8WUE5 264 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 PPP1R2P1Q96PQ5 205 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 LXNQ9BS40 222 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 C1orf109Q9NX04 203 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 HMGXB3Q12766 1538 aa-3.49□□□□□ -2.97
TRAJ53-201ENST00000390485 RAB19A4D1S5 217 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 TFF1P04155 84 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 SAA1P0DJI8 122 aaPredicted RBP-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 POLR2JP52435 117 aaKnown RBP-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 PSME3P61289 254 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 CDC37Q16543 378 aaPredicted RBP-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 CLVS2Q5SYC1 327 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 SLC35B4Q969S0 331 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 MYH1P12882 1939 aa-3.5□□□□□ -2.97
TRAJ53-201ENST00000390485 CICQ96RK0 1608 aaPredicted RBP-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 hCG_1818297A0A087WSY0 165 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 HIST1H2BKO60814 126 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 IFNA5P01569 189 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 HIST1H2BJP06899 126 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 STAG3L2P0CL84 134 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 UBE2G2P60604 165 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 HIST3H3Q16695 136 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 Q3ZCU0 254 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 OR51D1Q8NGF3 324 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 MAP3K1Q13233 1512 aa-3.51□□□□□ -2.97
TRAJ53-201ENST00000390485 TULP4Q9NRJ4 1543 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 EDF1O60869 148 aaKnown RBP-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 IFNA21P01568 189 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 CXCL1P09341 107 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 GALP22466 123 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 TMBIM6P55061 237 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 EDDM3BP56851 147 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 MYL6P60660 151 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 MRPS36P82909 103 aaKnown RBP-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 DEFB110Q30KQ9 67 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 C3orf33Q6P1S2 294 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 TMCO2Q7Z6W1 182 aaPredicted RBP-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 CLEC2BQ92478 149 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 SIGMAR1Q99720 223 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 VPS25Q9BRG1 176 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 PKIGQ9Y2B9 76 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 PATJQ8NI35 1801 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 RTL9Q8NET4 1388 aa-3.52□□□□□ -2.97
TRAJ53-201ENST00000390485 KIF27Q86VH2 1401 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 HPGDSO60760 199 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 PITX3O75364 302 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 CNIH1O95406 144 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 C8GP07360 202 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 STAG3L3P0CL85 134 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 GTF2A1P52655 376 aaPredicted RBP-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 HADHBP55084 474 aaKnown RBP-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 DEFA3P59666 94 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 NPC2P61916 151 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 ARF6P62330 175 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 ALX1Q15699 326 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 TMEM91Q6ZNR0 172 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 TRAPPC5Q8IUR0 188 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 OR6V1Q8N148 313 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 S4R3F8 94 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 WDR97A6NE52 1622 aa-3.53□□□□□ -2.97
TRAJ53-201ENST00000390485 GOLGA8KD6RF30 607 aa-3.54□□□□□ -2.98
TRAJ53-201ENST00000390485 CALUO43852 315 aaPredicted RBP-3.54□□□□□ -2.98
TRAJ53-201ENST00000390485 KDELR2P33947 212 aa-3.54□□□□□ -2.98
TRAJ53-201ENST00000390485 HRCT1Q6UXD1 115 aa-3.54□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms