RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 HYLS1Q96M11 299 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 LINC00479Q96M42 142 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 TMEM208Q9BTX3 173 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 NOP10Q9NPE3 64 aaKnown RBP4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 EPDR1Q9UM22 224 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 KLF12Q9Y4X4 402 aa4.9□□□□□ -1.63
TRAV12-3-201ENST00000390442 PKD1P98161 4303 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 IGHV1OR15-1A0A075B7D0 117 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 TEX48A0A1B0GUV7 120 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 MAP1LC3B2A6NCE7 125 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 SPINK4O60575 86 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 GPX1P07203 203 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 HTN1P15515 57 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 CSN1S1P47710 185 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 CRIP1P50238 77 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 TCL1AP56279 114 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 IBA57Q5T440 356 aaKnown RBP4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 Q6ZTI0 123 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 C9orf62Q8N4C0 152 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 EIF4E3Q8N5X7 224 aaKnown RBP4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 POM121L12Q8N7R1 296 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 ZNF471Q9BX82 626 aaPredicted RBP4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 MAP1LC3BQ9GZQ8 125 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 TIMM8BQ9Y5J9 83 aaPredicted RBP4.89□□□□□ -1.63
TRAV12-3-201ENST00000390442 HSPG2P98160 4391 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 TRAV26-1A0A087WT03 109 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 DEFB130BP0DP73 79 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 DEFB130AP0DP74 79 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 DAD1P61803 113 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 CCL20P78556 96 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 AKR1C8PQ5T2L2 129 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 TMEM75Q8N9X5 138 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 FAM210BQ96KR6 192 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 PSG8Q9UQ74 426 aa4.88□□□□□ -1.63
TRAV12-3-201ENST00000390442 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 IGKV3D-20A0A0C4DH25 116 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 KANTRA0A1W2PQU2 76 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 UMAD1C9J7I0 102 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 F6UZH7 168 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 GNRH2O43555 120 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 ATP5G3P48201 142 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 UBE2G2P60604 165 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 FLI1Q01543 452 aaPredicted RBP4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 LINC01620Q4KN68 170 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 FAM74A1Q5RGS3 127 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 MUC21Q5SSG8 566 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 MAPKAPK5-AS1Q8N8E1 139 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 CYB561D1Q8N8Q1 229 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 CMTM2Q8TAZ6 248 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 VSIG2Q96IQ7 327 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 TREM1Q9NP99 234 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 RPH3ALQ9UNE2 315 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 ARL2-SNX15V9GYD0 113 aa4.87□□□□□ -1.63
TRAV12-3-201ENST00000390442 TRBV6-1A0A0K0K1D8 114 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 M0R2N4 97 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 PEX7O00628 323 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 TYMSP04818 313 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 ATP5G1P05496 136 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 RNASE3P12724 160 aaKnown RBP4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 TPT1P13693 172 aaKnown RBP4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 SULT1A2P50226 295 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 LGALS9BQ3B8N2 356 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 DPPA3Q6W0C5 159 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 ZNF680Q8NEM1 530 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 RASL10AQ92737 203 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 HIST1H2BAQ96A08 127 aa4.86□□□□□ -1.63
TRAV12-3-201ENST00000390442 HERC1Q15751 4861 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 IGLV5-52A0A0A0MRZ9 124 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 FBLL1A6NHQ2 334 aaKnown RBP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 SNURFLB1AK76 121 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 F5H768 121 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 RTL8CO15255 209 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 GCGP01275 180 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 S100A9P06702 114 aaKnown RBP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 PFN1P07737 140 aaKnown RBP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 HTN3P15516 51 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 FHL2Q14192 279 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 TMEM183BQ1AE95 376 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 Q6ZR54 194 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 PRNTQ86SH4 94 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 Q86TA4 180 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 SLC51BQ86UW2 128 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 PRSS3P2Q8NHM4 247 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 LYPD6BQ8NI32 183 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 FAM213BQ8TBF2 198 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 ZC2HC1AQ96GY0 325 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 C9orf85Q96MD7 179 aa4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 NKX6-2Q9C056 277 aaPredicted RBP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 MRPL16Q9NX20 251 aaKnown RBP4.85□□□□□ -1.63
TRAV12-3-201ENST00000390442 H3BNG1 76 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms