RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 NF1P21359 2839 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 SPRY2O43597 315 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 SCRT2Q9NQ03 307 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
ACTN4-202ENST00000390009 A0A096LNJ9 63 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 TRAV12-3A0A0B4J271 114 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 M0R381 172 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 RNASE3P12724 160 aaKnown RBP13.55□□□□□ -0.24
ACTN4-202ENST00000390009 MAP1LC3CQ9BXW4 147 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 C7orf71A4D174 169 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 RNASE1P07998 156 aaKnown RBP13.55□□□□□ -0.24
ACTN4-202ENST00000390009 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
ACTN4-202ENST00000390009 SCGB2A2Q13296 93 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 SPATA45Q537H7 98 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 FAM159AQ6UWV7 190 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 FOXI2Q6ZQN5 318 aa13.55□□□□□ -0.24
ACTN4-202ENST00000390009 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
ACTN4-202ENST00000390009 MUC4Q99102 2169 aa13.54□□□□□ -0.24
ACTN4-202ENST00000390009 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
ACTN4-202ENST00000390009 MTORP42345 2549 aa13.53□□□□□ -0.24
ACTN4-202ENST00000390009 TMEM61Q8N0U2 210 aa13.53□□□□□ -0.24
ACTN4-202ENST00000390009 ZNF747Q9BV97 191 aa13.53□□□□□ -0.24
ACTN4-202ENST00000390009 TRAV12-2A0A075B6T6 113 aa13.52□□□□□ -0.24
ACTN4-202ENST00000390009 TRAV26-2A0A0B4J265 109 aa13.52□□□□□ -0.24
ACTN4-202ENST00000390009 CDKN1BP46527 198 aa13.52□□□□□ -0.24
ACTN4-202ENST00000390009 CD28P10747 220 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 MAJINQ3KP22 176 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 PET117Q6UWS5 81 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 OR2K2Q8NGT1 345 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 DYNLRB2Q8TF09 96 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 RAX2Q96IS3 184 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.25
ACTN4-202ENST00000390009 HECTD1Q9ULT8 2610 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 A0A1W2PRX2 142 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 C20orf202A1L168 122 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 HBDP02042 147 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 TSPOP30536 169 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 FXYD7P58549 80 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 SMR3AQ99954 134 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 C16orf95Q9H693 158 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
ACTN4-202ENST00000390009 TRAV2A0A0B4J234 112 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 LINC01546A6NGU7 62 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 OR4C46A6NHA9 309 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 H0Y8G0 127 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 CD7P09564 240 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 NRACQ8N912 160 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 TMEM160Q9NX00 188 aa13.51□□□□□ -0.25
ACTN4-202ENST00000390009 TRAV9-2A0A087WT02 112 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 DEFB131AP59861 70 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 C21orf62-AS1Q17RA5 79 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 AMTNQ6UX39 209 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 ZNF418Q8TF45 676 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-202ENST00000390009 MRAP2Q96G30 205 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 DPH3P1Q9H4G8 78 aa13.5□□□□□ -0.25
ACTN4-202ENST00000390009 FHL3Q13643 280 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 C14orf178Q8N769 122 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-202ENST00000390009 STPG4Q8N801 248 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 NXPH4O95158 308 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 HILS1P60008 231 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 DEFB114Q30KQ6 69 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 Q6ZN92 141 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 MCRIP2Q9BUT9 160 aaKnown RBP13.49□□□□□ -0.25
ACTN4-202ENST00000390009 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
ACTN4-202ENST00000390009 HNRNPA3P51991 378 aaKnown RBP13.48□□□□□ -0.25
ACTN4-202ENST00000390009 Q8N8P6 123 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 CITED2Q99967 270 aaPredicted RBP13.48□□□□□ -0.25
ACTN4-202ENST00000390009 IGLV2-18A0A075B6J9 118 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 CCL24O00175 119 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 LINC01545Q5VT33 79 aa13.48□□□□□ -0.25
ACTN4-202ENST00000390009 HLA-DRB4P13762 266 aa13.47□□□□□ -0.25
ACTN4-202ENST00000390009 PCP4P48539 62 aa13.47□□□□□ -0.25
ACTN4-202ENST00000390009 CD300EQ496F6 205 aaPredicted RBP13.47□□□□□ -0.25
ACTN4-202ENST00000390009 DEFB125Q8N687 156 aa13.47□□□□□ -0.25
ACTN4-202ENST00000390009 TSSC4Q9Y5U2 329 aaPredicted RBP13.47□□□□□ -0.25
ACTN4-202ENST00000390009 HLA-DRB4X5D2U9 266 aa13.47□□□□□ -0.25
ACTN4-202ENST00000390009 IGLL1P15814 213 aa13.46□□□□□ -0.25
ACTN4-202ENST00000390009 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.26
ACTN4-202ENST00000390009 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.26
ACTN4-202ENST00000390009 HIVEP2P31629 2446 aa13.46□□□□□ -0.26
ACTN4-202ENST00000390009 H3BMM0 161 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 MGPP08493 103 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 Q8N1Y9 231 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 PMCHL2Q9BQD1 86 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 MAP6D1Q9H9H5 199 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 A8MTW9 85 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 FCER1GP30273 86 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 C9orf85Q96MD7 179 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
ACTN4-202ENST00000390009 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-202ENST00000390009 ORAOV1Q8WV07 137 aa13.44□□□□□ -0.26
ACTN4-202ENST00000390009 SPAG8Q99932 426 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms