RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 OR10X1Q8NGY0 326 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 SIGMAR1Q99720 223 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 TP53AIP1Q9HCN2 124 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 FAM32AQ9Y421 112 aaKnown RBP-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 V9GYV3 84 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 LAMA2P24043 3122 aaKnown RBP-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 TACC2O95359 2948 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 NBASA2RRP1 2371 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 MYH1P12882 1939 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 WDR7Q9Y4E6 1490 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 ANKRD31Q8N7Z5 1873 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 SIPA1L3O60292 1781 aaPredicted RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 CASZ1Q86V15 1759 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 HYDINQ4G0P3 5121 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 RYR1P21817 5038 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 ZNF142P52746 1687 aaPredicted RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 TRAV1-2A0A0B4J238 106 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 TRBV6-1A0A0K0K1D8 114 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 A0A1B0GW64 132 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 RIIAD1A6NNX1 92 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 CETN3O15182 167 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 PIN1P1O15428 100 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 SPINK4O60575 86 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 NDUFC2O95298 119 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 APOA2P02652 100 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 FABP2P12104 132 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 MAGOHP61326 146 aaKnown RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 SCGB2B2Q4G0G5 96 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 C3orf33Q6P1S2 294 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 CROCCP2Q86T23 111 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 C20orf197Q8N268 126 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 OR8J2Q8NGG1 315 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 COX7B2Q8TF08 81 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 AP3S1Q92572 193 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 BTF3L4Q96K17 158 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 CCDC42Q96M95 316 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 PRELID3AQ96N28 172 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 VPS25Q9BRG1 176 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 NMNAT1Q9HAN9 279 aaPredicted RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 NKIRAS1Q9NYS0 192 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 PYCARDQ9ULZ3 195 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 PHIPQ8WWQ0 1821 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 WNK3Q9BYP7 1800 aa-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 TCOF1Q13428 1488 aaKnown RBP-0.8□□□□□ -2.54
SNORD28-201ENST00000384706 ZNF609O15014 1411 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 PTPRGP23470 1445 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 GOLGA4Q13439 2230 aaKnown RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 ERCC6L2Q5T890 1561 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 IGHV1-24A0A0C4DH33 117 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 CXorf51AA0A1B0GTR3 108 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 G3V2T6 193 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 M0R2P5 195 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 AIPO00170 330 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 TNRC18O15417 2968 aaPredicted RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 RPS17P08708 135 aaKnown RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 COX6B1P14854 86 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 RTL8BQ17RB0 113 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 DEFB135Q30KP9 77 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 LIN52Q52LA3 116 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 OR2T2Q6IF00 324 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 PPDPFLQ8WWR9 84 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 DGCR14Q96DF8 476 aaKnown RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 SPRR2FQ96RM1 72 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 PAIP2Q9BPZ3 127 aaKnown RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 RTL8AQ9BWD3 113 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 NPVFQ9HCQ7 196 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 SCN3BQ9NY72 215 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 KIF13AQ9H1H9 1805 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 EPPK1P58107 5090 aaKnown RBP-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 KDM3BQ7LBC6 1761 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 DNAH6Q9C0G6 4158 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 ADGBQ8N7X0 1667 aa-0.81□□□□□ -2.54
SNORD28-201ENST00000384706 LRP6O75581 1613 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 ARFGEF1Q9Y6D6 1849 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 ZMYM4Q5VZL5 1548 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 MAP1LC3B2A6NCE7 125 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 H3BQV1 296 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 H7C1C5 153 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 I3L2K1 104 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 SLC25A4P12235 298 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 CYBAP13498 195 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 CKS2P33552 79 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 S100A3P33764 101 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 PPP1R2P41236 205 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 HSPE1P61604 102 aaKnown RBP-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 NPC2P61916 151 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 LCN6P62502 163 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 BLCAPP62952 87 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 GNG5P63218 68 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 OR8B8Q15620 311 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 PIGYQ3MUY2 71 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 OR51A4Q8NGJ6 313 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 OTOSQ8NHW6 89 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 BRK1Q8WUW1 75 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 IFI27L1Q96BM0 104 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 BORCS8Q96FH0 119 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 OTORQ9NRC9 128 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 IL20Q9NYY1 176 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms