RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 CCDC42Q96M95 316 aa-1.95□□□□□ -2.72
RNU6-1040P-201ENST00000383974 GPX7Q96SL4 187 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1040P-201ENST00000383974 OR2J1Q9GZK6 312 aa-1.95□□□□□ -2.72
RNU6-1040P-201ENST00000383974 ATG5Q9H1Y0 275 aa-1.95□□□□□ -2.72
RNU6-1040P-201ENST00000383974 NCAPD3P42695 1498 aa-1.95□□□□□ -2.72
RNU6-1040P-201ENST00000383974 FGD6Q6ZV73 1430 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 KIAA1107Q9UPP5 1409 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 IFNA14P01570 189 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 APODP05090 189 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 CAPZBP47756 277 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 NDUFA6P56556 154 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 DNAJB13P59910 316 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 ELOF1P60002 83 aaKnown RBP-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 RHOHQ15669 191 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 OR10X1Q8NGY0 326 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 TMEM141Q96I45 108 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 LLPHQ9BRT6 129 aaKnown RBP-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 LINC00472Q9H8W2 130 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 C19orf12Q9NSK7 152 aa-1.96□□□□□ -2.72
RNU6-1040P-201ENST00000383974 RTL9Q8NET4 1388 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 DOCK11Q5JSL3 2073 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 BPTFQ12830 3046 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 C10orf71Q711Q0 1435 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 TPM3P06753 285 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 BCL2P10415 239 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 SPRR1BP22528 89 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 RPL35P42766 123 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 SSBP3-AS1Q7Z2R9 100 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 OR8J3Q8NGG0 315 aa-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 NMNAT1Q9HAN9 279 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1040P-201ENST00000383974 USP54Q70EL1 1684 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 ZNF815PA8K554 130 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TMEM114B3SHH9 223 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 H3BNG1 76 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 K7EP34 96 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SERPINA1P01009 418 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 NCALDP61601 193 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CCSMST1Q4G0I0 132 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 OR4B1Q8NGF8 309 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TAF9BQ9HBM6 251 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 BET1LQ9NYM9 111 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MYO15AQ9UKN7 3530 aa-1.98□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TROQ12816 1431 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TRAV17A0A0B4J275 112 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 A0A0D9SFI3 127 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TMEM189A5PLL7 270 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CDC42EP2O14613 210 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MT1EP04732 61 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 C1orf140Q5VVS0 124 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 PPP1R1CQ8WVI7 109 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CLEC2BQ92478 149 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 BTF3L4Q96K17 158 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 AGPAT4-IT1Q9H0P7 198 aa-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 FAM32AQ9Y421 112 aaKnown RBP-1.99□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TRAV12-2A0A075B6T6 113 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TRAV22A0A0B4J277 110 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 M0QX08 132 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SPINK4O60575 86 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 RPP14O95059 124 aaKnown RBP-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 RPS17P08708 135 aaKnown RBP-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 OGNP20774 298 aaKnown RBP-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 LSM6P62312 80 aaKnown RBP-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 OR5A2Q8NGI9 324 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MT1LQ93083 61 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 DIRC1Q969H9 104 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MCEEQ96PE7 176 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 OR2H1Q9GZK4 316 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MYH9P35579 1960 aaKnown RBP-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 ZFYVE9O95405 1425 aa-2□□□□□ -2.73
RNU6-1040P-201ENST00000383974 PIK3C2AO00443 1686 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TEX49A0A1B0GTD5 131 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 C5orf58C9J3I9 102 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 NDUFC2O95298 119 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 HSPE1P61604 102 aaKnown RBP-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TPM4P67936 248 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 MPC1Q9Y5U8 109 aa-2.01□□□□□ -2.73
RNU6-1040P-201ENST00000383974 ADGRB1O14514 1584 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 COL14A1Q05707 1796 aaKnown RBP-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CYBAP13498 195 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SDC4P31431 198 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SCGB2B2Q4G0G5 96 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CD109Q6YHK3 1445 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 CASKIN1Q8WXD9 1431 aa-2.02□□□□□ -2.73
RNU6-1040P-201ENST00000383974 RANBP2P49792 3224 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TRGV1A0A0A0MS02 117 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SMIM23A6NLE4 172 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 IFITM5A6NNB3 132 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 HAMPP81172 84 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 LIN52Q52LA3 116 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 Q6ZRX8 168 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 UBE2DNLQ8IWF7 75 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 OR8J2Q8NGG1 315 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 TMEM242Q9NWH2 141 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 COL4A6Q14031 1691 aa-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 SIPA1L3O60292 1781 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-1040P-201ENST00000383974 RIIAD1A6NNX1 92 aa-2.04□□□□□ -2.74
RNU6-1040P-201ENST00000383974 AIPO00170 330 aa-2.04□□□□□ -2.74
RNU6-1040P-201ENST00000383974 SPINK8P0C7L1 97 aa-2.04□□□□□ -2.74
RNU6-1040P-201ENST00000383974 PAIP2Q9BPZ3 127 aaKnown RBP-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms