RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.43
LINC00487-201ENST00000382045 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.43
LINC00487-201ENST00000382045 AP1S3Q96PC3 154 aa12.4□□□□□ -0.43
LINC00487-201ENST00000382045 BBC3Q96PG8 261 aaPredicted RBP12.4□□□□□ -0.43
LINC00487-201ENST00000382045 C20orf78Q9BR46 151 aa12.4□□□□□ -0.43
LINC00487-201ENST00000382045 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.43
LINC00487-201ENST00000382045 C7orf71A4D174 169 aa12.39□□□□□ -0.43
LINC00487-201ENST00000382045 DPM2O94777 84 aa12.39□□□□□ -0.43
LINC00487-201ENST00000382045 FSHBP01225 129 aa12.39□□□□□ -0.43
LINC00487-201ENST00000382045 CBY3A6NI87 242 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 RNF223E7ERA6 249 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 VAMP3Q15836 100 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 HSD52Q0P140 79 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 FAM159AQ6UWV7 190 aa12.38□□□□□ -0.43
LINC00487-201ENST00000382045 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
LINC00487-201ENST00000382045 MGPP08493 103 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 POM121L12Q8N7R1 296 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 A0A087WX48 190 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 K7EMI3 77 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 Q6YL49 198 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 WFDC12Q8WWY7 111 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
LINC00487-201ENST00000382045 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
LINC00487-201ENST00000382045 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
LINC00487-201ENST00000382045 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
LINC00487-201ENST00000382045 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
LINC00487-201ENST00000382045 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
LINC00487-201ENST00000382045 LINC00315P59091 139 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 TOMM6Q96B49 74 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 TMEM160Q9NX00 188 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 A0A0J9YX75 114 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 K7EQG2 157 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
LINC00487-201ENST00000382045 DOPEY2Q9Y3R5 2298 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 A0A087WW49 117 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 PPP1R17O96001 155 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 ELANEP08246 267 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 SNRPD3P62318 126 aaKnown RBP12.34□□□□□ -0.43
LINC00487-201ENST00000382045 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 LGALS9O00182 355 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 FOSL1P15407 271 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 OR4C5Q8NGB2 326 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 PTPN13Q12923 2485 aa12.34□□□□□ -0.43
LINC00487-201ENST00000382045 TRAV8-6A0A0B4J262 113 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 A6NDN8 102 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 CD7P09564 240 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 AMMECR1LQ6DCA0 310 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 UBE2E2Q96LR5 201 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
LINC00487-201ENST00000382045 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
LINC00487-201ENST00000382045 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 PLNP26678 52 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
LINC00487-201ENST00000382045 ZNF843Q8N446 348 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 JPT2Q9H910 190 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 PRRC2AP48634 2157 aaKnown RBP12.32□□□□□ -0.44
LINC00487-201ENST00000382045 TEX15Q9BXT5 2789 aa12.32□□□□□ -0.44
LINC00487-201ENST00000382045 AGRNO00468 2067 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 F8VRH5 84 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 IGKV3-20P01619 116 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 C2orf66Q6UXQ4 117 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
LINC00487-201ENST00000382045 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 TRAV12-2A0A075B6T6 113 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 H3BRM9 83 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 H7C1H1 209 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 NEXN-AS1Q8NBZ9 246 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 DUX5Q96PT3 197 aa12.31□□□□□ -0.44
LINC00487-201ENST00000382045 TRBV25-1A0A075B6N4 114 aa12.3□□□□□ -0.44
LINC00487-201ENST00000382045 IGHV3-16A0A0C4DH30 117 aa12.3□□□□□ -0.44
LINC00487-201ENST00000382045 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
LINC00487-201ENST00000382045 CDKN1BP46527 198 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
LINC00487-201ENST00000382045 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 A0A087WWL8 130 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 K7EP13 123 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 DEFB113Q30KQ7 82 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 Q5PR19 223 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 NAV2Q8IVL1 2488 aa12.29□□□□□ -0.44
LINC00487-201ENST00000382045 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
LINC00487-201ENST00000382045 SPINK13Q1W4C9 94 aa12.28□□□□□ -0.44
LINC00487-201ENST00000382045 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
LINC00487-201ENST00000382045 BAALCQ8WXS3 180 aa12.28□□□□□ -0.44
LINC00487-201ENST00000382045 CHTOPQ9Y3Y2 248 aaKnown RBP12.28□□□□□ -0.44
LINC00487-201ENST00000382045 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
LINC00487-201ENST00000382045 Q8N1Y9 231 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms