RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 M0R381 172 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 BRI3O95415 125 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 BSPH1Q075Z2 132 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 RBAKDNA6NC62 111 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 ELANEP08246 267 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 SLC25A29Q8N8R3 303 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 TSHBP01222 138 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 IGFL2Q6UWQ7 119 aa11.41□□□□□ -0.58
CTNS-202ENST00000381870 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
CTNS-202ENST00000381870 TEX49A0A1B0GTD5 131 aa11.4□□□□□ -0.58
CTNS-202ENST00000381870 J3KRW8 73 aa11.4□□□□□ -0.58
CTNS-202ENST00000381870 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
CTNS-202ENST00000381870 HES1Q14469 280 aa11.4□□□□□ -0.59
CTNS-202ENST00000381870 TMEM95Q3KNT9 176 aa11.4□□□□□ -0.59
CTNS-202ENST00000381870 PRR9Q5T870 116 aa11.4□□□□□ -0.59
CTNS-202ENST00000381870 C1orf122Q6ZSJ8 110 aa11.4□□□□□ -0.59
CTNS-202ENST00000381870 TIMD4Q96H15 378 aa11.4□□□□□ -0.59
CTNS-202ENST00000381870 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 MGAQ8IWI9 3026 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 CENPVL3A0A0U1RRI6 287 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 A4D1N5 150 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 LYNX1G3V0Z9 82 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 MGPP08493 103 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 LYNX1P0DP58 116 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
CTNS-202ENST00000381870 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 HERVK_113P61574 105 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 RNASE6Q93091 150 aaKnown RBP11.38□□□□□ -0.59
CTNS-202ENST00000381870 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 M0QXV9 152 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 BUB3O43684 328 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 IGF1P05019 195 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 POLEQ07864 2286 aa11.38□□□□□ -0.59
CTNS-202ENST00000381870 TRAV8-4A0A0B4J246 113 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 Q6Q795 121 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 NPBQ8NG41 125 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 AMELXQ99217 191 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 IGHV4-39P01824 125 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
CTNS-202ENST00000381870 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
CTNS-202ENST00000381870 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
CTNS-202ENST00000381870 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
CTNS-202ENST00000381870 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
CTNS-202ENST00000381870 C3orf56Q8N813 242 aa11.36□□□□□ -0.59
CTNS-202ENST00000381870 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
CTNS-202ENST00000381870 ARL3P36405 182 aa11.35□□□□□ -0.59
CTNS-202ENST00000381870 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
CTNS-202ENST00000381870 ZNRF2Q8NHG8 242 aa11.35□□□□□ -0.59
CTNS-202ENST00000381870 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
CTNS-202ENST00000381870 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
CTNS-202ENST00000381870 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
CTNS-202ENST00000381870 FAM57AQ8TBR7 257 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 CEP295Q9C0D2 2601 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 ATMQ13315 3056 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 IGIPA6NJ69 53 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 J3QQQ9 107 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 PMVKQ15126 192 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 Q1RN00 199 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
CTNS-202ENST00000381870 CLPSL1A2RUU4 121 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 P0DMU3 169 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 DEFB109BQ30KR1 87 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 ARHGAP32A7KAX9 2087 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
CTNS-202ENST00000381870 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
CTNS-202ENST00000381870 CLEC3BP05452 202 aa11.32□□□□□ -0.6
CTNS-202ENST00000381870 LGALS3P17931 250 aaKnown RBP11.32□□□□□ -0.6
CTNS-202ENST00000381870 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
CTNS-202ENST00000381870 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
CTNS-202ENST00000381870 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
CTNS-202ENST00000381870 H3BMM0 161 aa11.31□□□□□ -0.6
CTNS-202ENST00000381870 C15orf32Q32M92 178 aa11.31□□□□□ -0.6
CTNS-202ENST00000381870 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
CTNS-202ENST00000381870 UBE2WQ96B02 151 aa11.31□□□□□ -0.6
CTNS-202ENST00000381870 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
CTNS-202ENST00000381870 LGALS9O00182 355 aa11.31□□□□□ -0.6
CTNS-202ENST00000381870 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
CTNS-202ENST00000381870 IGHV3-64A0A075B6Q5 118 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 TRBV10-2A0A0K0K1G8 114 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 E7EQL1 145 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 FOXC1Q12948 553 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 PIEZO1Q92508 2521 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
CTNS-202ENST00000381870 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
CTNS-202ENST00000381870 TRIAP1O43715 76 aa11.29□□□□□ -0.6
CTNS-202ENST00000381870 DEFB1P60022 68 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms