RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 SIGLEC9Q9Y336 463 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 LINC00473A8K010 186 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 BLCAPP62952 87 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 ARTNQ5T4W7 220 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 MED12Q93074 2177 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 COL4A1P02462 1669 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 TET1Q8NFU7 2136 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
CLCN4-202ENST00000380833 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
CLCN4-202ENST00000380833 FAM223BA6NKX1 122 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 FAM223AQ8IWN6 122 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 TP53BP1Q12888 1972 aaPredicted RBP8.51□□□□□ -1.05
CLCN4-202ENST00000380833 PATJQ8NI35 1801 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 IGKV1D-17A0A075B6S4 117 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 IGHV1-69DA0A0B4J2H0 117 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 IGHV1-69P01742 117 aa8.51□□□□□ -1.05
CLCN4-202ENST00000380833 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 K7ENP7 123 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
CLCN4-202ENST00000380833 QRFPP83859 136 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 Q6P435 159 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 CFHR4Q92496 578 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 USMG5Q96IX5 58 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 GVINP1Q7Z2Y8 2422 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 SCN5AQ14524 2016 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 SRRM5B3KS81 715 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 CTRLP40313 264 aa8.5□□□□□ -1.05
CLCN4-202ENST00000380833 C9orf139Q6ZV77 190 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 F8WDY8 70 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 IGHV4-59P01825 116 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 COL4A6Q14031 1691 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 Q6ZS92 163 aa8.49□□□□□ -1.05
CLCN4-202ENST00000380833 SDHAF1A6NFY7 115 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 TM2D2Q9BX73 214 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 PDE6GP18545 87 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 Q6ZS49 121 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 DYSFO75923 2080 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 PLXNA1Q9UIW2 1896 aa8.48□□□□□ -1.05
CLCN4-202ENST00000380833 K7ERS5 55 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 SLURP1P55000 103 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 Q6ZRM9 215 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 DEFB112Q30KQ8 113 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 SBF2Q86WG5 1849 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 TTTY13Q9BZ97 58 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 ABCA1O95477 2261 aa8.47□□□□□ -1.05
CLCN4-202ENST00000380833 TMEM256-PLSCR3K7ERE1 68 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 ENHOQ6UWT2 76 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 COX7B2Q8TF08 81 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 C2orf70A6NJV1 201 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 IGLV3-19P01714 112 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 SHANK2-AS3Q9BTD1 123 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 TPSG1Q9NRR2 321 aa8.46□□□□□ -1.05
CLCN4-202ENST00000380833 TUBGCP6Q96RT7 1819 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 Q9H8V8 135 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 PTPRFP10586 1907 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 IGLV3-12A0A075B6K2 115 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 TRBV6-6A0A0A6YYG2 114 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 LMO1P25800 156 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 FOXE3Q13461 319 aa8.46□□□□□ -1.06
CLCN4-202ENST00000380833 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.45□□□□□ -1.06
CLCN4-202ENST00000380833 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
CLCN4-202ENST00000380833 CFAP126Q5VTH2 177 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 CCL24O00175 119 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
CLCN4-202ENST00000380833 FLVCR1-AS1Q8TAF5 88 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 ADAMTS7Q9UKP4 1686 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 TIRAPP58753 221 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 RMI2Q96E14 147 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 DOCK11Q5JSL3 2073 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 DOCK8Q8NF50 2099 aa8.45□□□□□ -1.06
CLCN4-202ENST00000380833 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
CLCN4-202ENST00000380833 USF3Q68DE3 2245 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 ZNF407Q9C0G0 2248 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 P0DMU3 169 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
CLCN4-202ENST00000380833 DAZ4Q86SG3 579 aaKnown RBP8.44□□□□□ -1.06
CLCN4-202ENST00000380833 DAZ3Q9NR90 486 aaKnown RBP8.44□□□□□ -1.06
CLCN4-202ENST00000380833 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 NPBQ8NG41 125 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 DOCK4Q8N1I0 1966 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
CLCN4-202ENST00000380833 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 Q8TCH9 128 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 K7EM74 188 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 PRSS33Q8NF86 280 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 SIPA1L3O60292 1781 aaPredicted RBP8.43□□□□□ -1.06
CLCN4-202ENST00000380833 LECT2O14960 151 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms