RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 KRTAP1-3Q8IUG1 177 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 TRAV8-2A0A0B4J237 113 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 NDUFA4O00483 81 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 SH2D1AO60880 128 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 FSHBP01225 129 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 C20orf78Q9BR46 151 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 ITPR2Q14571 2701 aa10.86□□□□□ -0.67
CLCN4-201ENST00000380829 TLN2Q9Y4G6 2542 aa10.86□□□□□ -0.67
CLCN4-201ENST00000380829 J3KRW8 73 aa10.86□□□□□ -0.67
CLCN4-201ENST00000380829 ZNF80P51504 273 aaPredicted RBP10.86□□□□□ -0.67
CLCN4-201ENST00000380829 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
CLCN4-201ENST00000380829 F8W1H4 67 aa10.85□□□□□ -0.67
CLCN4-201ENST00000380829 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
CLCN4-201ENST00000380829 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
CLCN4-201ENST00000380829 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
CLCN4-201ENST00000380829 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
CLCN4-201ENST00000380829 Q6YL49 198 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 IGLL5B9A064 214 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 HBDP02042 147 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 PSMB8P28062 276 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 IL17RELQ6ZVW7 336 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 C16orf92Q96LL3 132 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
CLCN4-201ENST00000380829 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 E9PLD3 99 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 RIGQ13278 110 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
CLCN4-201ENST00000380829 SS18L2Q9UHA2 77 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 EDN2P20800 178 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 WFDC11Q8NEX6 87 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 PRELID3AQ96N28 172 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 AGPAT4-IT1Q9H0P7 198 aa10.83□□□□□ -0.68
CLCN4-201ENST00000380829 IGKV3-7A0A075B6H7 116 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 TRBV25-1A0A075B6N4 114 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 RPL11P62913 178 aaKnown RBP10.82□□□□□ -0.68
CLCN4-201ENST00000380829 GPHB5Q86YW7 130 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 C20orf173Q96LM9 149 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 CEND1Q8N111 149 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
CLCN4-201ENST00000380829 ITPR3Q14573 2671 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 FHL3Q13643 280 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 GTSCR1Q86UQ5 136 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 SYT8Q8NBV8 401 aa10.81□□□□□ -0.68
CLCN4-201ENST00000380829 GAGE13Q4V321 117 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 J3QKU1 62 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 ORM1P02763 201 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 TMEM78Q5T7P6 136 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 RNF183Q96D59 192 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 ZNF702PQ9H963 129 aa10.8□□□□□ -0.68
CLCN4-201ENST00000380829 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
CLCN4-201ENST00000380829 IGHV7-4-1A0A0J9YVY3 117 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 APOMO95445 188 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 NPYP01303 97 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 DEFB1P60022 68 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 Q6AWC8 147 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 MRPL53Q96EL3 112 aaKnown RBP10.79□□□□□ -0.68
CLCN4-201ENST00000380829 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 HECTD1Q9ULT8 2610 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 SRD5A1P18405 259 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 ORMDL3Q8N138 153 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 ZNF418Q8TF45 676 aaPredicted RBP10.79□□□□□ -0.68
CLCN4-201ENST00000380829 PSMG3-AS1Q96PY0 264 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 HIGD1BQ9P298 99 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 HHLA3Q9XRX5 114 aa10.79□□□□□ -0.68
CLCN4-201ENST00000380829 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 TSPAN13O95857 204 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 ZNF575Q86XF7 245 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 GATD1Q8NB37 220 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 SOCS3O14543 225 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 ODF1Q14990 250 aa10.78□□□□□ -0.68
CLCN4-201ENST00000380829 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
CLCN4-201ENST00000380829 FLNBO75369 2602 aaKnown RBP10.78□□□□□ -0.68
CLCN4-201ENST00000380829 XGP55808 180 aa10.77□□□□□ -0.68
CLCN4-201ENST00000380829 C12orf74Q32Q52 190 aa10.77□□□□□ -0.68
CLCN4-201ENST00000380829 Q6ZQT7 251 aa10.77□□□□□ -0.68
CLCN4-201ENST00000380829 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.68
CLCN4-201ENST00000380829 TM2D2Q9BX73 214 aa10.77□□□□□ -0.68
CLCN4-201ENST00000380829 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
CLCN4-201ENST00000380829 FCER1GP30273 86 aa10.77□□□□□ -0.69
CLCN4-201ENST00000380829 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
CLCN4-201ENST00000380829 SETXQ7Z333 2677 aaKnown RBP10.76□□□□□ -0.69
CLCN4-201ENST00000380829 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 SONP18583 2426 aaKnown RBP10.76□□□□□ -0.69
CLCN4-201ENST00000380829 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms