RNA–Protein interactions for RNA: ENST00000379892.4

DCLK1-203, Transcript of doublecortin like kinase 1, humanhuman

TSL 5 BASIC

Gene DCLK1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-203ENST00000379892 AP1S3Q96PC3 154 aa13.58□□□□□ -0.23
DCLK1-203ENST00000379892 NXPH4O95158 308 aa13.58□□□□□ -0.24
DCLK1-203ENST00000379892 ORMDL2Q53FV1 153 aa13.58□□□□□ -0.24
DCLK1-203ENST00000379892 H3BRM9 83 aa13.57□□□□□ -0.24
DCLK1-203ENST00000379892 K7EP13 123 aa13.57□□□□□ -0.24
DCLK1-203ENST00000379892 TGFAP01135 160 aa13.57□□□□□ -0.24
DCLK1-203ENST00000379892 RNASE8Q8TDE3 154 aaKnown RBP13.57□□□□□ -0.24
DCLK1-203ENST00000379892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.57□□□□□ -0.24
DCLK1-203ENST00000379892 TOMM6Q96B49 74 aa13.57□□□□□ -0.24
DCLK1-203ENST00000379892 MUC4Q99102 2169 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 PRB1P04280 392 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 SAMD13Q5VXD3 122 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 POM121L12Q8N7R1 296 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 KIF25-AS1Q9Y6Z4 181 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 ZANQ9Y493 2812 aa13.56□□□□□ -0.24
DCLK1-203ENST00000379892 ZNF688P0C7X2 276 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 FAM159AQ6UWV7 190 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 HIGD1BQ9P298 99 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 ACACBO00763 2458 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 TRAV12-3A0A0B4J271 114 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 C9orf118A6NHY6 69 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 J3QLI3 93 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 LINC00315P59091 139 aa13.55□□□□□ -0.24
DCLK1-203ENST00000379892 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
DCLK1-203ENST00000379892 JMJD8Q96S16 334 aa13.54□□□□□ -0.24
DCLK1-203ENST00000379892 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
DCLK1-203ENST00000379892 CHAC1Q9BUX1 264 aa13.54□□□□□ -0.24
DCLK1-203ENST00000379892 JPT2Q9H910 190 aa13.54□□□□□ -0.24
DCLK1-203ENST00000379892 USP9YO00507 2555 aaPredicted RBP13.54□□□□□ -0.24
DCLK1-203ENST00000379892 K7EMI3 77 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 PLNP26678 52 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 NAA38Q9BRA0 125 aaKnown RBP13.53□□□□□ -0.24
DCLK1-203ENST00000379892 CSTL1Q9H114 145 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
DCLK1-203ENST00000379892 ANKRD17O75179 2603 aaKnown RBP13.53□□□□□ -0.24
DCLK1-203ENST00000379892 F8VRH5 84 aa13.52□□□□□ -0.24
DCLK1-203ENST00000379892 H7C1H1 209 aa13.52□□□□□ -0.24
DCLK1-203ENST00000379892 CD7P09564 240 aa13.52□□□□□ -0.24
DCLK1-203ENST00000379892 SYNJ2BPP57105 145 aa13.52□□□□□ -0.24
DCLK1-203ENST00000379892 C2orf66Q6UXQ4 117 aa13.52□□□□□ -0.24
DCLK1-203ENST00000379892 H3BUT2 72 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 NEGR1Q7Z3B1 354 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 RAB37Q96AX2 223 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 VPREB3Q9UKI3 123 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 POLQO75417 2590 aa13.52□□□□□ -0.25
DCLK1-203ENST00000379892 A0A0J9YX75 114 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 K7EQG2 157 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 PPP1R17O96001 155 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 GCSHP23434 173 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 IGHV4OR15-8A0A075B7B6 117 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 A0A087WW49 117 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 COX6B1P14854 86 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 FXYD2P54710 66 aa13.51□□□□□ -0.25
DCLK1-203ENST00000379892 CHTOPQ9Y3Y2 248 aaKnown RBP13.51□□□□□ -0.25
DCLK1-203ENST00000379892 FSHBP01225 129 aa13.5□□□□□ -0.25
DCLK1-203ENST00000379892 LGALS1P09382 135 aaKnown RBP13.5□□□□□ -0.25
DCLK1-203ENST00000379892 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
DCLK1-203ENST00000379892 ODF3Q96PU9 254 aa13.5□□□□□ -0.25
DCLK1-203ENST00000379892 ZNF702PQ9H963 129 aa13.5□□□□□ -0.25
DCLK1-203ENST00000379892 A0A087WWL8 130 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 SUMO4Q6EEV6 95 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 Q6YL49 198 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 GAGE10A6NGK3 116 aa13.49□□□□□ -0.25
DCLK1-203ENST00000379892 IGHV3-16A0A0C4DH30 117 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 IGHV4-31P0DP07 118 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 RBX1P62877 108 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 ZFYVE26Q68DK2 2539 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 ELANEP08246 267 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 UFSP1Q6NVU6 142 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 C9orf85Q96MD7 179 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 BBC3Q96PG8 261 aaPredicted RBP13.48□□□□□ -0.25
DCLK1-203ENST00000379892 MDFICQ9P1T7 246 aa13.48□□□□□ -0.25
DCLK1-203ENST00000379892 MXRA5Q9NR99 2828 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 ZNF462Q96JM2 2506 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 CENPEQ02224 2701 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 LGALS9O00182 355 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
DCLK1-203ENST00000379892 BEX4Q9NWD9 120 aaPredicted RBP13.47□□□□□ -0.25
DCLK1-203ENST00000379892 CBY1Q9Y3M2 126 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 DOPEY2Q9Y3R5 2298 aa13.47□□□□□ -0.25
DCLK1-203ENST00000379892 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 PRSS29PA6NIE9 313 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.25
DCLK1-203ENST00000379892 KRTAP10-9P60411 292 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 RPL32P62910 135 aaKnown RBP13.46□□□□□ -0.25
DCLK1-203ENST00000379892 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 DEFB104AQ8WTQ1 72 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 CST9LQ9H4G1 147 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 USP24Q9UPU5 2620 aa13.46□□□□□ -0.25
DCLK1-203ENST00000379892 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.26
DCLK1-203ENST00000379892 DUSP14O95147 198 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms