RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LAGE3Q14657 143 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 ATP6V0E2Q8NHE4 81 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 KCNIP2Q9NS61 270 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 HMCN2Q8NDA2 5059 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 LRRC37A5PQ49AS3 106 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
PDLIM4-202ENST00000379018 PGPA6NDG6 321 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 RBFOX3A6NFN3 312 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 RAB14P61106 215 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 KHDC3LQ587J8 217 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 SGK494Q96LW2 274 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 UBR4Q5T4S7 5183 aa11.72□□□□□ -0.53
PDLIM4-202ENST00000379018 RS1O15537 224 aa11.71□□□□□ -0.53
PDLIM4-202ENST00000379018 GNG5P63218 68 aa11.71□□□□□ -0.53
PDLIM4-202ENST00000379018 TVP23CQ96ET8 276 aa11.71□□□□□ -0.53
PDLIM4-202ENST00000379018 KCNS1Q96KK3 526 aa11.71□□□□□ -0.53
PDLIM4-202ENST00000379018 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 TRBV6-4A0A1B0GX49 114 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 GAGE1Q13065 139 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 GAGE4Q13068 117 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 GAGE5Q13069 117 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 GAGE13Q4V321 117 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 TMED6Q8WW62 240 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 OTORQ9NRC9 128 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 OR5AC2Q9NZP5 309 aa11.7□□□□□ -0.54
PDLIM4-202ENST00000379018 TAAR5O14804 337 aa11.69□□□□□ -0.54
PDLIM4-202ENST00000379018 TAS2R45P59539 299 aa11.69□□□□□ -0.54
PDLIM4-202ENST00000379018 FAM74A1Q5RGS3 127 aa11.69□□□□□ -0.54
PDLIM4-202ENST00000379018 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
PDLIM4-202ENST00000379018 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 OXTP01178 125 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 ZNF506Q5JVG8 444 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 CHAC1Q9BUX1 264 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
PDLIM4-202ENST00000379018 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 TOR2AQ5JU69 321 aa11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
PDLIM4-202ENST00000379018 H0YIZ8 118 aa11.66□□□□□ -0.54
PDLIM4-202ENST00000379018 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
PDLIM4-202ENST00000379018 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
PDLIM4-202ENST00000379018 SMIM3Q9BZL3 60 aa11.66□□□□□ -0.54
PDLIM4-202ENST00000379018 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
PDLIM4-202ENST00000379018 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
PDLIM4-202ENST00000379018 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
PDLIM4-202ENST00000379018 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
PDLIM4-202ENST00000379018 RMI2Q96E14 147 aa11.65□□□□□ -0.54
PDLIM4-202ENST00000379018 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
PDLIM4-202ENST00000379018 CIDEAO60543 219 aa11.64□□□□□ -0.55
PDLIM4-202ENST00000379018 Q8N976 141 aa11.64□□□□□ -0.55
PDLIM4-202ENST00000379018 SCGB1C1Q8TD33 95 aa11.64□□□□□ -0.55
PDLIM4-202ENST00000379018 C9orf85Q96MD7 179 aa11.64□□□□□ -0.55
PDLIM4-202ENST00000379018 GCGP01275 180 aa11.63□□□□□ -0.55
PDLIM4-202ENST00000379018 CYTL1Q9NRR1 136 aa11.63□□□□□ -0.55
PDLIM4-202ENST00000379018 Q9UF83 564 aa11.63□□□□□ -0.55
PDLIM4-202ENST00000379018 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
PDLIM4-202ENST00000379018 EIF5AL1Q6IS14 154 aaKnown RBP11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 COMMD7Q86VX2 200 aa11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 SAMD10Q9BYL1 202 aa11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 SH3BGRL3Q9H299 93 aa11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 PARLQ9H300 379 aa11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 KLK12Q9UKR0 248 aa11.62□□□□□ -0.55
PDLIM4-202ENST00000379018 A0A1W2PPV4 95 aa11.61□□□□□ -0.55
PDLIM4-202ENST00000379018 RPL37AP61513 92 aaKnown RBP11.61□□□□□ -0.55
PDLIM4-202ENST00000379018 UBE2WQ96B02 151 aa11.61□□□□□ -0.55
PDLIM4-202ENST00000379018 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
PDLIM4-202ENST00000379018 LINC00694P0DN24 101 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 RAB2AP61019 212 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 ACOT6Q3I5F7 207 aaPredicted RBP11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 ALKAL2Q6UX46 152 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 CYB561D1Q8N8Q1 229 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 JPT2Q9H910 190 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
PDLIM4-202ENST00000379018 KRBOX1C9JBD0 128 aa11.59□□□□□ -0.55
PDLIM4-202ENST00000379018 S100A4P26447 101 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms