RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 DSCAML1Q8TD84 2053 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 CRYGBP07316 175 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
NPHS1-202ENST00000378910 VPS13AQ96RL7 3174 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 TRAV21A0A0B4J279 112 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 LGALS9O00182 355 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 OVOL1O14753 267 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 LYPD2Q6UXB3 125 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
NPHS1-202ENST00000378910 TRGV3P03979 118 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 PCNX2A6NKB5 2137 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 IGHG2P01859 326 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 IGHG3P01860 377 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 HCFC1P51610 2035 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
NPHS1-202ENST00000378910 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
NPHS1-202ENST00000378910 SERP2Q8N6R1 65 aa9.27□□□□□ -0.93
NPHS1-202ENST00000378910 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
NPHS1-202ENST00000378910 RNF5Q99942 180 aa9.27□□□□□ -0.93
NPHS1-202ENST00000378910 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
NPHS1-202ENST00000378910 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
NPHS1-202ENST00000378910 C20orf197Q8N268 126 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 PRR25Q96S07 402 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 AGPAT4-IT1Q9H0P7 198 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 ERCC8Q13216 396 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 MYO15AQ9UKN7 3530 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 IGHV3-64A0A075B6Q5 118 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
NPHS1-202ENST00000378910 Q8N8P6 123 aa9.26□□□□□ -0.93
NPHS1-202ENST00000378910 H3BT86 120 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 IGLV2-8P01709 118 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 C15orf32Q32M92 178 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
NPHS1-202ENST00000378910 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 TIMM17BO60830 172 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 ZFHX2Q9C0A1 2572 aaPredicted RBP9.25□□□□□ -0.93
NPHS1-202ENST00000378910 F8VRH5 84 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 PROP1O75360 226 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 SPG11Q96JI7 2443 aa9.25□□□□□ -0.93
NPHS1-202ENST00000378910 NOTCH2Q04721 2471 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 IGLV1-44P01699 117 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 NSUN5P1Q3KNT7 163 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 NDUFA11Q86Y39 141 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 DPH3P1Q9H4G8 78 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 LY6EQ16553 131 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 TMEM131Q92545 1883 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.24□□□□□ -0.93
NPHS1-202ENST00000378910 EML5Q05BV3 1969 aa9.24□□□□□ -0.93
NPHS1-202ENST00000378910 H3BRN7 92 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 K7EM74 188 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 CXCL5P42830 114 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 SUMO2P61956 95 aaKnown RBP9.23□□□□□ -0.93
NPHS1-202ENST00000378910 C19orf54Q5BKX5 351 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 C9orf85Q96MD7 179 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 IGHV3-11P01762 117 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 GP9P14770 177 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 EFNA4P52798 201 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 STHQ8IWL8 128 aa9.23□□□□□ -0.93
NPHS1-202ENST00000378910 CD59P13987 128 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 RHOHQ15669 191 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 C2orf66Q6UXQ4 117 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 MOB4Q9Y3A3 225 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 FOXE3Q13461 319 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 LINC00311Q8N616 119 aa9.22□□□□□ -0.93
NPHS1-202ENST00000378910 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.93
NPHS1-202ENST00000378910 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
NPHS1-202ENST00000378910 NBL1P41271 181 aa9.21□□□□□ -0.94
NPHS1-202ENST00000378910 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
NPHS1-202ENST00000378910 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.94
NPHS1-202ENST00000378910 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.94
NPHS1-202ENST00000378910 IGLV3-9A0A075B6K5 115 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
NPHS1-202ENST00000378910 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 TANC2Q9HCD6 1990 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 EGR2P11161 476 aaPredicted RBP9.2□□□□□ -0.94
NPHS1-202ENST00000378910 NDPQ00604 133 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 MBD6Q96DN6 1003 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
NPHS1-202ENST00000378910 PAX8Q06710 450 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 ZNF672Q499Z4 452 aaPredicted RBP9.2□□□□□ -0.94
NPHS1-202ENST00000378910 SPRNQ5BIV9 151 aa9.2□□□□□ -0.94
NPHS1-202ENST00000378910 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
NPHS1-202ENST00000378910 GHRHP01286 108 aa9.19□□□□□ -0.94
NPHS1-202ENST00000378910 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms