RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PHLDA1Q8WV24 401 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-202ENST00000377865 CRIP1P50238 77 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 Q71RC1 249 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-202ENST00000377865 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 A4D1N5 150 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 PAX4O43316 350 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 ARHGAP21Q5T5U3 1957 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 SOCS3O14543 225 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 ODF3BA8MYP8 253 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 SPATA25Q9BR10 227 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 TRAV13-1A0A0B4J241 112 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 A0A0B4J2C4 111 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 H3BT86 120 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 HERV-K104P63124 156 aa6.75□□□□□ -1.33
PCDH9-202ENST00000377865 DEFB131AP59861 70 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 MSMBP08118 114 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 KLHL30-AS1Q8NEE0 82 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 ESPL1Q14674 2120 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 B5MCH6 92 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 HIST1H4AP62805 103 aaKnown RBP6.74□□□□□ -1.33
PCDH9-202ENST00000377865 Q6ZUT4 128 aa6.74□□□□□ -1.33
PCDH9-202ENST00000377865 C5orf56Q8N8D9 126 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 AHCTF1Q8WYP5 2266 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 MRPL23Q16540 153 aaKnown RBP6.73□□□□□ -1.33
PCDH9-202ENST00000377865 LY6LH3BQJ8 138 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 F6UB75 175 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 TCL1BO95988 128 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
PCDH9-202ENST00000377865 K7EMT4 169 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 TRACP01848 142 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 C11orf68Q9H3H3 251 aaKnown RBP6.72□□□□□ -1.33
PCDH9-202ENST00000377865 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 SS18Q15532 418 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 DYSFO75923 2080 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 CACNA1EQ15878 2313 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
PCDH9-202ENST00000377865 TRAV26-1A0A087WT03 109 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 PF4P02776 101 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 KNCNA6PVL3 124 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 J3QLI3 93 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 ELANEP08246 267 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 C6orf226Q5I0X4 101 aa6.71□□□□□ -1.33
PCDH9-202ENST00000377865 VWC2LB2RUY7 222 aa6.71□□□□□ -1.34
PCDH9-202ENST00000377865 CNFNQ9BYD5 112 aa6.71□□□□□ -1.34
PCDH9-202ENST00000377865 SIRPDQ9H106 197 aa6.71□□□□□ -1.34
PCDH9-202ENST00000377865 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.34
PCDH9-202ENST00000377865 ODF3Q96PU9 254 aa6.71□□□□□ -1.34
PCDH9-202ENST00000377865 P0DMU3 169 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 FAM231AP0DMU4 169 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 FAM231CP0DMU5 169 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-53P01767 116 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 BAALC-AS2P0C853 105 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 RPL32P62910 135 aaKnown RBP6.7□□□□□ -1.34
PCDH9-202ENST00000377865 ZNRF2Q8NHG8 242 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
PCDH9-202ENST00000377865 MED12LQ86YW9 2145 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 ATP5G1P05496 136 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 SMAD5-AS1Q9Y6J3 95 aa6.7□□□□□ -1.34
PCDH9-202ENST00000377865 A0A1W2PRX2 142 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV4-4A0A075B6R2 117 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 EBI3Q14213 229 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 SVILO95425 2214 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 FBXL19-AS1Q494R0 122 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 Q9H8V8 135 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 FAM186AA6NE01 2351 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 TMEM89A2RUT3 159 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 NRACQ8N912 160 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-38A0A0C4DH36 116 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 SPRY2O43597 315 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 WISP2O76076 250 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 NSUN5P1Q3KNT7 163 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 ZMAT4Q9H898 229 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 LAMTOR3Q9UHA4 124 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 HCFC1P51610 2035 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 COX8CQ7Z4L0 72 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 JPT2Q9H910 190 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 MIAQ16674 131 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms