RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 MEGF9Q9H1U4 602 aa12.27□□□□□ -0.45
TRIM27-202ENST00000377199 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.45
TRIM27-202ENST00000377199 ANKRD17O75179 2603 aaKnown RBP12.26□□□□□ -0.45
TRIM27-202ENST00000377199 SOCS3O14543 225 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 OVOL1O14753 267 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 SAP30O75446 220 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 EMP1P54849 157 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 DUX5Q96PT3 197 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 AGRNO00468 2067 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 TLN2Q9Y4G6 2542 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 A6NDX4 124 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
TRIM27-202ENST00000377199 DAZ1Q9NQZ3 744 aaKnown RBP12.26□□□□□ -0.45
TRIM27-202ENST00000377199 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 F5H697 171 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 IGHV4-59P01825 116 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 DPH3P1Q9H4G8 78 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
TRIM27-202ENST00000377199 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 MXRA5Q9NR99 2828 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 SIVA1O15304 175 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 RNASE3P12724 160 aaKnown RBP12.24□□□□□ -0.45
TRIM27-202ENST00000377199 MRAP2Q96G30 205 aa12.24□□□□□ -0.45
TRIM27-202ENST00000377199 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 PTPN13Q12923 2485 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 A0A087WX48 190 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 CD7P09564 240 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 MUC4Q99102 2169 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 IGHV4-4A0A075B6R2 117 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
TRIM27-202ENST00000377199 C2orf66Q6UXQ4 117 aa12.22□□□□□ -0.45
TRIM27-202ENST00000377199 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
TRIM27-202ENST00000377199 ZNF462Q96JM2 2506 aa12.22□□□□□ -0.45
TRIM27-202ENST00000377199 HTN1P15515 57 aa12.22□□□□□ -0.45
TRIM27-202ENST00000377199 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
TRIM27-202ENST00000377199 FBN2P35556 2912 aa12.22□□□□□ -0.45
TRIM27-202ENST00000377199 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
TRIM27-202ENST00000377199 SAMD5Q5TGI4 173 aa12.21□□□□□ -0.45
TRIM27-202ENST00000377199 SMPXQ9UHP9 88 aa12.21□□□□□ -0.45
TRIM27-202ENST00000377199 CRIP2P52943 208 aaPredicted RBP12.21□□□□□ -0.45
TRIM27-202ENST00000377199 DEFB112Q30KQ8 113 aa12.21□□□□□ -0.45
TRIM27-202ENST00000377199 HIST1H4GQ99525 98 aa12.21□□□□□ -0.45
TRIM27-202ENST00000377199 K7EP34 96 aa12.2□□□□□ -0.46
TRIM27-202ENST00000377199 FABP2P12104 132 aa12.2□□□□□ -0.46
TRIM27-202ENST00000377199 CDKN1BP46527 198 aa12.2□□□□□ -0.46
TRIM27-202ENST00000377199 ORMDL2Q53FV1 153 aa12.2□□□□□ -0.46
TRIM27-202ENST00000377199 SCGB2A2Q13296 93 aa12.2□□□□□ -0.46
TRIM27-202ENST00000377199 F8VRH5 84 aa12.19□□□□□ -0.46
TRIM27-202ENST00000377199 H7C1H1 209 aa12.19□□□□□ -0.46
TRIM27-202ENST00000377199 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
TRIM27-202ENST00000377199 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
TRIM27-202ENST00000377199 B4DSR2 109 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 TGFAP01135 160 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 PLNP26678 52 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 CYSLTR1Q9Y271 337 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 OR11H12B2RN74 326 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
TRIM27-202ENST00000377199 CEND1Q8N111 149 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 MTURNQ8N3F0 131 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
TRIM27-202ENST00000377199 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 RIPPLY3P57055 190 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 ATP6V0BQ99437 205 aa12.18□□□□□ -0.46
TRIM27-202ENST00000377199 SONP18583 2426 aaKnown RBP12.17□□□□□ -0.46
TRIM27-202ENST00000377199 NDUFS8O00217 210 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 PRB1P04280 392 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 CD300EQ496F6 205 aaPredicted RBP12.17□□□□□ -0.46
TRIM27-202ENST00000377199 TOMM6Q96B49 74 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 ID1P41134 155 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 DCANP1Q8TF63 244 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 NOTCH3Q9UM47 2321 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 TP53TG1Q9Y2A0 90 aa12.17□□□□□ -0.46
TRIM27-202ENST00000377199 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
TRIM27-202ENST00000377199 RNF223E7ERA6 249 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 K7ERU9 68 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 H3BUA1 57 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 HLA-DRB4P13762 266 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 HLA-DRB4X5D2U9 266 aa12.16□□□□□ -0.46
TRIM27-202ENST00000377199 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.46
TRIM27-202ENST00000377199 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms