RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRIM27-201ENST00000377194 Q6ZUT4 128 aa13.07□□□□□ -0.32
TRIM27-201ENST00000377194 PSMB2P49721 201 aa13.07□□□□□ -0.32
TRIM27-201ENST00000377194 ATP5J2P56134 94 aa13.07□□□□□ -0.32
TRIM27-201ENST00000377194 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
TRIM27-201ENST00000377194 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 LY6EQ16553 131 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 LOC107984156A0A0G2JMH3 177 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 ARL17AQ8IVW1 177 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 TRAV8-2A0A0B4J237 113 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 TRAV26-2A0A0B4J265 109 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 ATP5LO75964 103 aa13.06□□□□□ -0.32
TRIM27-201ENST00000377194 TGFAP01135 160 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 CFAP126Q5VTH2 177 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 NRGNQ92686 78 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 METTL26Q96S19 204 aa13.05□□□□□ -0.32
TRIM27-201ENST00000377194 USP9YO00507 2555 aaPredicted RBP13.04□□□□□ -0.32
TRIM27-201ENST00000377194 HOXA3O43365 443 aaPredicted RBP13.04□□□□□ -0.32
TRIM27-201ENST00000377194 TSPAN13O95857 204 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 TRGV3P03979 118 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 Q6ZS46 218 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 U3KQE9 123 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
TRIM27-201ENST00000377194 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 LINC01549A6NIU2 74 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 TAL2Q16559 108 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 Q8N8P6 123 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 CNFNQ9BYD5 112 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 KLK15Q9H2R5 256 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 IGLV2-18A0A075B6J9 118 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 BLCAPP62952 87 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 MYOZ3Q8TDC0 251 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 ERG28Q9UKR5 140 aa13.03□□□□□ -0.32
TRIM27-201ENST00000377194 POLQO75417 2590 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 CENPEQ02224 2701 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 H3BUX3 64 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 AVPP01185 164 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 CRIP2P52943 208 aaPredicted RBP13.02□□□□□ -0.32
TRIM27-201ENST00000377194 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 CARD19Q96LW7 228 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 ANAPC13Q9BS18 74 aa13.02□□□□□ -0.32
TRIM27-201ENST00000377194 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
TRIM27-201ENST00000377194 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.33
TRIM27-201ENST00000377194 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
TRIM27-201ENST00000377194 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
TRIM27-201ENST00000377194 IGF1P05019 195 aa13.01□□□□□ -0.33
TRIM27-201ENST00000377194 ANXA2RQ3ZCQ2 193 aa13.01□□□□□ -0.33
TRIM27-201ENST00000377194 Q6ZQT7 251 aa13.01□□□□□ -0.33
TRIM27-201ENST00000377194 C11orf21Q9P2W6 132 aa13.01□□□□□ -0.33
TRIM27-201ENST00000377194 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
TRIM27-201ENST00000377194 A0A087WX48 190 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 MYMXA0A1B0GTQ4 84 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 FAM223BA6NKX1 122 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 MSMBP08118 114 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 ZANQ9Y493 2812 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 RBAKDNA6NC62 111 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 OR11H12B2RN74 326 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 ARL3P36405 182 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 LINC01559Q495D7 138 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 OR11H1Q8NG94 326 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 OR11H2Q8NH07 326 aa13□□□□□ -0.33
TRIM27-201ENST00000377194 B5MCH6 92 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 IGHV3-11P01762 117 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 FBN2P35556 2912 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 A6NDX4 124 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 H3BVH4 76 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 IGHG2P01859 326 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 SRSF2Q01130 221 aaKnown RBP12.99□□□□□ -0.33
TRIM27-201ENST00000377194 LAGE3Q14657 143 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 HIF1ANQ9NWT6 349 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 UFC1Q9Y3C8 167 aa12.99□□□□□ -0.33
TRIM27-201ENST00000377194 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
TRIM27-201ENST00000377194 USP24Q9UPU5 2620 aa12.98□□□□□ -0.33
TRIM27-201ENST00000377194 ZNF462Q96JM2 2506 aa12.98□□□□□ -0.33
TRIM27-201ENST00000377194 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
TRIM27-201ENST00000377194 LRRK2Q5S007 2527 aa12.97□□□□□ -0.33
TRIM27-201ENST00000377194 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
TRIM27-201ENST00000377194 PLEKHB2Q96CS7 222 aa12.97□□□□□ -0.33
TRIM27-201ENST00000377194 C20orf173Q96LM9 149 aa12.97□□□□□ -0.33
TRIM27-201ENST00000377194 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
TRIM27-201ENST00000377194 NRACQ8N912 160 aa12.96□□□□□ -0.33
TRIM27-201ENST00000377194 PLNP26678 52 aa12.96□□□□□ -0.33
TRIM27-201ENST00000377194 C16orf92Q96LL3 132 aa12.96□□□□□ -0.33
TRIM27-201ENST00000377194 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.34
TRIM27-201ENST00000377194 PPDPFLQ8WWR9 84 aa12.96□□□□□ -0.34
TRIM27-201ENST00000377194 PRB1P04280 392 aa12.95□□□□□ -0.34
TRIM27-201ENST00000377194 PF4V1P10720 104 aa12.95□□□□□ -0.34
TRIM27-201ENST00000377194 DEFB1P60022 68 aa12.95□□□□□ -0.34
TRIM27-201ENST00000377194 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIM27-201ENST00000377194 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
TRIM27-201ENST00000377194 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
TRIM27-201ENST00000377194 ANKRD17O75179 2603 aaKnown RBP12.94□□□□□ -0.34
TRIM27-201ENST00000377194 ZNF815PA8K554 130 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms