RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 LEPP41159 167 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 FOXI2Q6ZQN5 318 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 AGRNO00468 2067 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
TRIM40-206ENST00000376724 AMTP48728 403 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 SPANXN1Q5VSR9 72 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 NIT1Q86X76 327 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 CNFNQ9BYD5 112 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
TRIM40-206ENST00000376724 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
TRIM40-206ENST00000376724 D6R8Y8 96 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 PPBPP02775 128 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 ASIPP42127 132 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 FXYD7P58549 80 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 KRTAP10-3P60369 221 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 C7orf71A4D174 169 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 ADARB2-AS1A8MUL3 147 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-206ENST00000376724 HSBP1O75506 76 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
TRIM40-206ENST00000376724 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 Q8N976 141 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 COX11Q9Y6N1 276 aa9.6□□□□□ -0.87
TRIM40-206ENST00000376724 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
TRIM40-206ENST00000376724 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 SMKR1H3BMG3 65 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 M0R381 172 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 SAP30O75446 220 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 CRLF1O75462 422 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
TRIM40-206ENST00000376724 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
TRIM40-206ENST00000376724 TRAV2A0A0B4J234 112 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 SNAI2O43623 268 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 NCR2O95944 276 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 EVI2AP22794 236 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 TSPOP30536 169 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 CKS2P33552 79 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 Q6ZN92 141 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 SPAG8Q99932 426 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-206ENST00000376724 LOC389332A0A1B0GUA5 103 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 CD7P09564 240 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 PMCHL1Q16048 86 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 PRELID3AQ96N28 172 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 ZNF256Q9Y2P7 627 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-206ENST00000376724 PHLDA3Q9Y5J5 127 aa9.58□□□□□ -0.88
TRIM40-206ENST00000376724 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-206ENST00000376724 H3BMM0 161 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 HLA-DRB4P13762 266 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 CACNG7P62955 275 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 AMTNQ6UX39 209 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
TRIM40-206ENST00000376724 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
TRIM40-206ENST00000376724 KRTDAPP60985 99 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 MRPS16Q9Y3D3 137 aaKnown RBP9.56□□□□□ -0.88
TRIM40-206ENST00000376724 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
TRIM40-206ENST00000376724 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 OR4C5Q8NGB2 326 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 U3KQK5 164 aa9.56□□□□□ -0.88
TRIM40-206ENST00000376724 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 NDUFA11Q86Y39 141 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 NPYP01303 97 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 PF4P02776 101 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 HTN1P15515 57 aa9.55□□□□□ -0.88
TRIM40-206ENST00000376724 IFI27P40305 119 aaPredicted RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 CHTOPQ9Y3Y2 248 aaKnown RBP9.55□□□□□ -0.88
TRIM40-206ENST00000376724 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
TRIM40-206ENST00000376724 ODF3L2Q3SX64 289 aa9.54□□□□□ -0.88
TRIM40-206ENST00000376724 SCRT2Q9NQ03 307 aa9.54□□□□□ -0.88
TRIM40-206ENST00000376724 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 MED14OSP0DP75 135 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 GATA1P15976 413 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-206ENST00000376724 HINT1P49773 126 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-206ENST00000376724 FA2HQ7L5A8 372 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 Q8N1Y9 231 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-206ENST00000376724 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 CBY3A6NI87 242 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 CRXO43186 299 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms