RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 SYNJ2BPP57105 145 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 C1orf122Q6ZSJ8 110 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 CPAMD8Q8IZJ3 1885 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 F6UB75 175 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 BUB3O43684 328 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 LINC00310P59036 64 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 SH2D6Q7Z4S9 175 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 K7EMI3 77 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 IGLL5B9A064 214 aa13.09□□□□□ -0.31
VARS-215ENST00000375663 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 GNRH2O43555 120 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 GNLYP22749 145 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
VARS-215ENST00000375663 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
VARS-215ENST00000375663 FASNP49327 2511 aaKnown RBP13.08□□□□□ -0.32
VARS-215ENST00000375663 ZNF493Q6ZR52 646 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 TRAV12-2A0A075B6T6 113 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
VARS-215ENST00000375663 C1orf159Q96HA4 380 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 J3QQQ9 107 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 PRRC2CQ9Y520 2896 aaKnown RBP13.07□□□□□ -0.32
VARS-215ENST00000375663 CHD9Q3L8U1 2897 aa13.07□□□□□ -0.32
VARS-215ENST00000375663 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
VARS-215ENST00000375663 FANCD2OSQ96PS1 177 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 TRAV8-3A0A0A6YYJ7 113 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 FGF6P10767 208 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 DEFB131AP59861 70 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 ODF1Q14990 250 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 RPL39LQ96EH5 51 aaKnown RBP13.06□□□□□ -0.32
VARS-215ENST00000375663 HIGD1BQ9P298 99 aa13.06□□□□□ -0.32
VARS-215ENST00000375663 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
VARS-215ENST00000375663 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
VARS-215ENST00000375663 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
VARS-215ENST00000375663 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
VARS-215ENST00000375663 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
VARS-215ENST00000375663 WFDC2Q14508 124 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 I3L3M4 83 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 CENPVL3A0A0U1RRI6 287 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 PF4P02776 101 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 TCF15Q12870 199 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 Q8N9W7 124 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 TRAV13-1A0A0B4J241 112 aa13.04□□□□□ -0.32
VARS-215ENST00000375663 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
VARS-215ENST00000375663 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
VARS-215ENST00000375663 MYCNOSP40205 109 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 RASL10AQ92737 203 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 TRGV4A0A0C4DH28 118 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 IGHV3-53P01767 116 aa13.03□□□□□ -0.32
VARS-215ENST00000375663 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.32
VARS-215ENST00000375663 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.32
VARS-215ENST00000375663 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.32
VARS-215ENST00000375663 RBMY1A1P0DJD3 496 aaKnown RBP13.02□□□□□ -0.32
VARS-215ENST00000375663 RBMY1CP0DJD4 496 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 PRIMA1Q86XR5 153 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 ATP6V0BQ99437 205 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 MSMBP08118 114 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.32
VARS-215ENST00000375663 LINC00158P58513 81 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.32
VARS-215ENST00000375663 IGF2-ASQ6U949 168 aa13.02□□□□□ -0.33
VARS-215ENST00000375663 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
VARS-215ENST00000375663 KLHL30-AS1Q8NEE0 82 aa13.02□□□□□ -0.33
VARS-215ENST00000375663 SLC25A20O43772 301 aa13.01□□□□□ -0.33
VARS-215ENST00000375663 NDUFA12Q9UI09 145 aa13.01□□□□□ -0.33
VARS-215ENST00000375663 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
VARS-215ENST00000375663 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
VARS-215ENST00000375663 PKD1L2Q7Z442 2459 aa13□□□□□ -0.33
VARS-215ENST00000375663 LRRK2Q5S007 2527 aa13□□□□□ -0.33
VARS-215ENST00000375663 DSCR9P59020 149 aa12.99□□□□□ -0.33
VARS-215ENST00000375663 ARHGAP32A7KAX9 2087 aa12.99□□□□□ -0.33
VARS-215ENST00000375663 H3BMM0 161 aa12.99□□□□□ -0.33
VARS-215ENST00000375663 UBE2WQ96B02 151 aa12.99□□□□□ -0.33
VARS-215ENST00000375663 INSP01308 110 aa12.98□□□□□ -0.33
VARS-215ENST00000375663 CRPP02741 224 aa12.98□□□□□ -0.33
VARS-215ENST00000375663 RHODO00212 210 aa12.98□□□□□ -0.33
VARS-215ENST00000375663 ZNF48Q96MX3 618 aaPredicted RBP12.98□□□□□ -0.33
VARS-215ENST00000375663 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
VARS-215ENST00000375663 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
VARS-215ENST00000375663 Q8N976 141 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 G3V4G9 280 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 HTN3P15516 51 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 CRIP1P50238 77 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 RBX1P62877 108 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 DSCAMO60469 2012 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
VARS-215ENST00000375663 C16orf54Q6UWD8 224 aa12.96□□□□□ -0.33
VARS-215ENST00000375663 PAX4O43316 350 aa12.96□□□□□ -0.33
VARS-215ENST00000375663 CFC1BP0CG36 223 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms