RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 LGALSLQ3ZCW2 172 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-202ENST00000375271 C14orf177Q52M58 125 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 Q8N3U1 123 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 ARL6IP6Q8N6S5 226 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 CYB561D1Q8N8Q1 229 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 OR5AC2Q9NZP5 309 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 A8MWV9 139 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
PTCH1-202ENST00000375271 SMUG1Q53HV7 270 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 DPPA3Q6W0C5 159 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 SGK494Q96LW2 274 aa9.29□□□□□ -0.92
PTCH1-202ENST00000375271 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 ZFP2Q6ZN57 461 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 OR10G9Q8NGN4 311 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 OR2T35Q8NGX2 323 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 SMIM3Q9BZL3 60 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 DNAH8Q96JB1 4490 aa9.28□□□□□ -0.92
PTCH1-202ENST00000375271 EIF3GO75821 320 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTCH1-202ENST00000375271 SIX6O95475 246 aa9.27□□□□□ -0.93
PTCH1-202ENST00000375271 CRPP02741 224 aa9.27□□□□□ -0.93
PTCH1-202ENST00000375271 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
PTCH1-202ENST00000375271 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
PTCH1-202ENST00000375271 RBM38Q9H0Z9 239 aaKnown RBP9.27□□□□□ -0.93
PTCH1-202ENST00000375271 PARLQ9H300 379 aa9.27□□□□□ -0.93
PTCH1-202ENST00000375271 RHODO00212 210 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 ASIPP42127 132 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 PTH2Q96A98 100 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 CCDC32Q9BV29 185 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 HSPB11Q9Y547 144 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
PTCH1-202ENST00000375271 RNF222A6NCQ9 220 aa9.25□□□□□ -0.93
PTCH1-202ENST00000375271 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
PTCH1-202ENST00000375271 Q0VG73 95 aa9.25□□□□□ -0.93
PTCH1-202ENST00000375271 TMEM75Q8N9X5 138 aa9.25□□□□□ -0.93
PTCH1-202ENST00000375271 OR2G3Q8NGZ4 309 aa9.25□□□□□ -0.93
PTCH1-202ENST00000375271 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
PTCH1-202ENST00000375271 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 TCRAP04437 139 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 ZNF80P51504 273 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-202ENST00000375271 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-202ENST00000375271 SAPCD1Q5SSQ6 148 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 NIT1Q86X76 327 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
PTCH1-202ENST00000375271 TMEM262E9PQX1 116 aa9.23□□□□□ -0.93
PTCH1-202ENST00000375271 ARL14EPLP0DKL9 152 aa9.23□□□□□ -0.93
PTCH1-202ENST00000375271 RNASE3P12724 160 aaKnown RBP9.23□□□□□ -0.93
PTCH1-202ENST00000375271 RPL12P30050 165 aaKnown RBP9.23□□□□□ -0.93
PTCH1-202ENST00000375271 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-202ENST00000375271 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
PTCH1-202ENST00000375271 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-202ENST00000375271 PPP1R1CQ8WVI7 109 aa9.23□□□□□ -0.93
PTCH1-202ENST00000375271 C11orf21Q9P2W6 132 aa9.23□□□□□ -0.93
PTCH1-202ENST00000375271 H0YIZ8 118 aa9.22□□□□□ -0.93
PTCH1-202ENST00000375271 RAB2AP61019 212 aa9.22□□□□□ -0.93
PTCH1-202ENST00000375271 SAMD10Q9BYL1 202 aa9.22□□□□□ -0.93
PTCH1-202ENST00000375271 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
PTCH1-202ENST00000375271 SSNA1O43805 119 aa9.21□□□□□ -0.94
PTCH1-202ENST00000375271 HLA-DQA1P01909 254 aa9.21□□□□□ -0.94
PTCH1-202ENST00000375271 LINC00694P0DN24 101 aa9.21□□□□□ -0.94
PTCH1-202ENST00000375271 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
PTCH1-202ENST00000375271 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-202ENST00000375271 OR11H4Q8NGC9 324 aa9.21□□□□□ -0.94
PTCH1-202ENST00000375271 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
PTCH1-202ENST00000375271 B4DEV8 164 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 H3BVH4 76 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-202ENST00000375271 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
PTCH1-202ENST00000375271 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 TMEM167BQ9NRX6 74 aa9.2□□□□□ -0.94
PTCH1-202ENST00000375271 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 MPC2O95563 127 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 PKIAP61925 76 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 DNAJC30Q96LL9 226 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 JPT2Q9H910 190 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
PTCH1-202ENST00000375271 A0A0D9SG52 128 aa9.18□□□□□ -0.94
PTCH1-202ENST00000375271 IFNA7P01567 189 aa9.18□□□□□ -0.94
PTCH1-202ENST00000375271 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
PTCH1-202ENST00000375271 TPT1P13693 172 aaKnown RBP9.18□□□□□ -0.94
PTCH1-202ENST00000375271 GCHFRP30047 84 aa9.18□□□□□ -0.94
PTCH1-202ENST00000375271 C15orf54Q8N8G6 183 aa9.18□□□□□ -0.94
PTCH1-202ENST00000375271 HSD17B11Q8NBQ5 300 aa9.18□□□□□ -0.94
PTCH1-202ENST00000375271 FAT3Q8TDW7 4589 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 A0A087WWL8 130 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms