RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
RXRB-202ENST00000374685 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
RXRB-202ENST00000374685 FABP2P12104 132 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 EVI2AP22794 236 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 DEFB113Q30KQ7 82 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 UFC1Q9Y3C8 167 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 TMEM190Q8WZ59 177 aa13.88□□□□□ -0.19
RXRB-202ENST00000374685 CR1P17927 2039 aa13.87□□□□□ -0.19
RXRB-202ENST00000374685 NOTCH3Q9UM47 2321 aa13.87□□□□□ -0.19
RXRB-202ENST00000374685 SIVA1O15304 175 aa13.87□□□□□ -0.19
RXRB-202ENST00000374685 IGKV3-20P01619 116 aa13.87□□□□□ -0.19
RXRB-202ENST00000374685 GATA1P15976 413 aaPredicted RBP13.87□□□□□ -0.19
RXRB-202ENST00000374685 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
RXRB-202ENST00000374685 DAZ1Q9NQZ3 744 aaKnown RBP13.87□□□□□ -0.19
RXRB-202ENST00000374685 FBLL1A6NHQ2 334 aaKnown RBP13.86□□□□□ -0.19
RXRB-202ENST00000374685 H3BVH4 76 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 TCTAP57738 103 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 ORMDL3Q8N138 153 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 OR9G4Q8NGQ1 327 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 OR10J6PQ8NGY7 276 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 AGRNO00468 2067 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 NPYP01303 97 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 RAB37Q96AX2 223 aa13.86□□□□□ -0.19
RXRB-202ENST00000374685 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 ADAMTSL5Q6ZMM2 481 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 RBAKDNA6NC62 111 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 J3QR89 54 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 RNASE4P34096 147 aaKnown RBP13.85□□□□□ -0.19
RXRB-202ENST00000374685 KHDC1LQ5JSQ8 128 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 MRAP2Q96G30 205 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 SIGLEC8Q9NYZ4 499 aa13.85□□□□□ -0.19
RXRB-202ENST00000374685 A0A1B0GW15 77 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 H3BUA1 57 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 PSMB8P28062 276 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 SYNJ2BPP57105 145 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 OR8A1Q8NGG7 326 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 TRAV26-2A0A0B4J265 109 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 CFHR3Q02985 330 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 COX8CQ7Z4L0 72 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 VPREB3Q9UKI3 123 aa13.84□□□□□ -0.19
RXRB-202ENST00000374685 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.19
RXRB-202ENST00000374685 ZNF747Q9BV97 191 aa13.83□□□□□ -0.19
RXRB-202ENST00000374685 LINC01559Q495D7 138 aa13.83□□□□□ -0.2
RXRB-202ENST00000374685 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
RXRB-202ENST00000374685 ZNF493Q6ZR52 646 aa13.83□□□□□ -0.2
RXRB-202ENST00000374685 C9orf47Q6ZRZ4 202 aa13.83□□□□□ -0.2
RXRB-202ENST00000374685 HECTD1Q9ULT8 2610 aa13.83□□□□□ -0.2
RXRB-202ENST00000374685 M0R381 172 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 DUX3Q96PT4 197 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 WFDC11Q8NEX6 87 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 SPANXB1Q9NS25 103 aaPredicted RBP13.82□□□□□ -0.2
RXRB-202ENST00000374685 J3QLI3 93 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 C18orf65Q6ZTR6 163 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 MTURNQ8N3F0 131 aa13.82□□□□□ -0.2
RXRB-202ENST00000374685 S100A4P26447 101 aaKnown RBP13.81□□□□□ -0.2
RXRB-202ENST00000374685 C18orf15Q96N68 181 aa13.8□□□□□ -0.2
RXRB-202ENST00000374685 GEMIN7Q9H840 131 aaKnown RBP13.8□□□□□ -0.2
RXRB-202ENST00000374685 SOCS3O14543 225 aa13.8□□□□□ -0.2
RXRB-202ENST00000374685 FASNP49327 2511 aaKnown RBP13.8□□□□□ -0.2
RXRB-202ENST00000374685 SMIM13P0DJ93 91 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 MRPL53Q96EL3 112 aaKnown RBP13.79□□□□□ -0.2
RXRB-202ENST00000374685 IGHV4OR15-8A0A075B7B6 117 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 A0A087WW49 117 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 ZFAND2AQ8N6M9 145 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
RXRB-202ENST00000374685 PSMG4Q5JS54 123 aa13.78□□□□□ -0.2
RXRB-202ENST00000374685 Q6YL49 198 aa13.78□□□□□ -0.2
RXRB-202ENST00000374685 F8W1H4 67 aa13.78□□□□□ -0.2
RXRB-202ENST00000374685 GNRH2O43555 120 aa13.78□□□□□ -0.2
RXRB-202ENST00000374685 ANXA2RQ3ZCQ2 193 aa13.77□□□□□ -0.2
RXRB-202ENST00000374685 GATD1Q8NB37 220 aa13.77□□□□□ -0.2
RXRB-202ENST00000374685 ZNF702PQ9H963 129 aa13.77□□□□□ -0.2
RXRB-202ENST00000374685 DEFB104AQ8WTQ1 72 aa13.77□□□□□ -0.21
RXRB-202ENST00000374685 OVOL1O14753 267 aa13.77□□□□□ -0.21
RXRB-202ENST00000374685 TSPAN13O95857 204 aa13.77□□□□□ -0.21
RXRB-202ENST00000374685 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
RXRB-202ENST00000374685 SPAG8Q99932 426 aaPredicted RBP13.77□□□□□ -0.21
RXRB-202ENST00000374685 NIPBLQ6KC79 2804 aaeCLIP13.76□□□□□ -0.21
RXRB-202ENST00000374685 A0A096LNJ9 63 aa13.76□□□□□ -0.21
RXRB-202ENST00000374685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.76□□□□□ -0.21
RXRB-202ENST00000374685 LGALS9BQ3B8N2 356 aa13.76□□□□□ -0.21
RXRB-202ENST00000374685 LGALS9CQ6DKI2 356 aa13.76□□□□□ -0.21
RXRB-202ENST00000374685 TRAV12-2A0A075B6T6 113 aa13.75□□□□□ -0.21
RXRB-202ENST00000374685 TNFRSF6BO95407 300 aa13.75□□□□□ -0.21
RXRB-202ENST00000374685 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
RXRB-202ENST00000374685 MRPL16Q9NX20 251 aaKnown RBP13.75□□□□□ -0.21
RXRB-202ENST00000374685 SLURP1P55000 103 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 WFDC2Q14508 124 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 MAP1LC3AQ9H492 121 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 U3KQK5 164 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 UNC79Q9P2D8 2635 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 TRAV12-3A0A0B4J271 114 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms