RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FOXE3Q13461 319 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 C15orf32Q32M92 178 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 KLK5Q9Y337 293 aaPredicted RBP7.99□□□□□ -1.13
CD28-202ENST00000374481 PRR14LQ5THK1 2151 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 P0DMU3 169 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 LAMTOR3Q9UHA4 124 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 LINC01619G3V211 115 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 IGLV3-19P01714 112 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 SNRPD3P62318 126 aaKnown RBP7.98□□□□□ -1.13
CD28-202ENST00000374481 DYNAPQ8N1N2 210 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 U3KQK5 164 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 IGFBPL1Q8WX77 278 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 DSCR8Q96T75 97 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 HCFC1P51610 2035 aa7.98□□□□□ -1.13
CD28-202ENST00000374481 PHLDA1Q8WV24 401 aaPredicted RBP7.97□□□□□ -1.13
CD28-202ENST00000374481 RNF5Q99942 180 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 J3QKU1 62 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 DEFB124Q8NES8 71 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 WI2-2373I1.2A0A1W2PRP0 233 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 SPRY2O43597 315 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 C11orf53Q8IXP5 236 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 TMEM86BQ8N661 226 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 WFDC11Q8NEX6 87 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 SAP25Q8TEE9 199 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 GHRHP01286 108 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 IGKV1-17P01599 117 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 C9orf106Q8NAJ2 232 aa7.97□□□□□ -1.13
CD28-202ENST00000374481 NUP210Q8TEM1 1887 aaPredicted RBP7.96□□□□□ -1.13
CD28-202ENST00000374481 IGKV1D-37A0A075B6S9 117 aa7.96□□□□□ -1.13
CD28-202ENST00000374481 TRIAP1O43715 76 aa7.96□□□□□ -1.13
CD28-202ENST00000374481 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.13
CD28-202ENST00000374481 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 MYCNOSP40205 109 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 UBE2D3P61077 147 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 UBE2D2P62837 147 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 C1orf195Q5TG92 126 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 MALRD1Q5VYJ5 2156 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 NUP210LQ5VU65 1888 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 EIF4EBP1Q13541 118 aaPredicted RBP7.96□□□□□ -1.14
CD28-202ENST00000374481 COL6A6A6NMZ7 2263 aa7.96□□□□□ -1.14
CD28-202ENST00000374481 RPL39P62891 51 aaKnown RBP7.95□□□□□ -1.14
CD28-202ENST00000374481 RNF138Q8WVD3 245 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 PSMB8P28062 276 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
CD28-202ENST00000374481 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 A0A096LNJ9 63 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 E7EUB6 86 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 I3L3M4 83 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 UBE2D1P51668 147 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 NEXN-AS1Q8NBZ9 246 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 TRBV30A0A0K0K1B3 111 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
CD28-202ENST00000374481 PATE3B3GLJ2 98 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 C1orf159Q96HA4 380 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 IGHV3OR16-12A0A075B7B8 117 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 TRAV13-2A0A0B4J235 113 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 PAX8Q06710 450 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 FAM27E3Q08E93 113 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 TEX36Q5VZQ5 186 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 SPRR3Q9UBC9 169 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 IGHV3-30P01768 117 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 IGHV3-30-5P0DP03 117 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 PFN2P35080 140 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 ABCA4P78363 2273 aa7.94□□□□□ -1.14
CD28-202ENST00000374481 FAM240AA0A1B0GVK7 77 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 CD59P13987 128 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 BPTFQ12830 3046 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 INS-IGF2F8WCM5 200 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 BUB1B-PAK6H3BSN5 160 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 CRIP1P50238 77 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 DAZ4Q86SG3 579 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 DAZ1Q9NQZ3 744 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 DAZ3Q9NR90 486 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
CD28-202ENST00000374481 DAND5Q8N907 189 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 TIMM17AQ99595 171 aa7.93□□□□□ -1.14
CD28-202ENST00000374481 EML5Q05BV3 1969 aa7.92□□□□□ -1.14
CD28-202ENST00000374481 TRAV23DV6A0A075B6W5 121 aa7.92□□□□□ -1.14
CD28-202ENST00000374481 IGHV3-11P01762 117 aa7.92□□□□□ -1.14
CD28-202ENST00000374481 DAZAP2Q15038 168 aaPredicted RBP7.92□□□□□ -1.14
CD28-202ENST00000374481 XIRP2A4UGR9 3374 aa7.92□□□□□ -1.14
CD28-202ENST00000374481 PCNX1Q96RV3 2341 aa7.92□□□□□ -1.14
CD28-202ENST00000374481 ZNF80P51504 273 aaPredicted RBP7.92□□□□□ -1.14
CD28-202ENST00000374481 CNOT1A5YKK6 2376 aaKnown RBP7.92□□□□□ -1.14
CD28-202ENST00000374481 Q0VFX4 171 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 DKK1O94907 266 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms