RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 LINC00315P59091 139 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 FHL2Q14192 279 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 EREGO14944 169 aa13.15□□□□□ -0.3
TRAPPC3-204ENST00000373166 AKR1C3P42330 323 aa13.15□□□□□ -0.3
TRAPPC3-204ENST00000373166 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
TRAPPC3-204ENST00000373166 FABP5P3A8MUU1 101 aa13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 C1QBP02746 253 aa13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 LGALSLQ3ZCW2 172 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 PCNPQ8WW12 178 aaKnown RBP13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 FRZBQ92765 325 aa13.14□□□□□ -0.31
TRAPPC3-204ENST00000373166 hCG_2014768A0A024R1R8 64 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 C9JCJ5 164 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 RAB5CP51148 216 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 XGP55808 180 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 MRPL23Q16540 153 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 ZNF876PQ49A33 203 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 Q6ZRN7 208 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 C9orf85Q96MD7 179 aa13.13□□□□□ -0.31
TRAPPC3-204ENST00000373166 S100A4P26447 101 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-204ENST00000373166 Q5VSD8 79 aa13.12□□□□□ -0.31
TRAPPC3-204ENST00000373166 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
TRAPPC3-204ENST00000373166 MYCBP2O75592 4640 aa13.12□□□□□ -0.31
TRAPPC3-204ENST00000373166 LTAP01374 205 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 ORM1P02763 201 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 SRIP30626 198 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 ASIPP42127 132 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 ERVFC1-1P60608 527 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 FAM162BQ5T6X4 162 aa13.11□□□□□ -0.31
TRAPPC3-204ENST00000373166 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 B4DEV8 164 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 MANBALQ9NQG1 85 aa13.1□□□□□ -0.31
TRAPPC3-204ENST00000373166 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 SIVA1O15304 175 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 SH2D1AO60880 128 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 GYPEP15421 78 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.313e-8■□□□□ 8.2
TRAPPC3-204ENST00000373166 ZNF506Q5JVG8 444 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 NEGR1Q7Z3B1 354 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 PTH2Q96A98 100 aa13.09□□□□□ -0.31
TRAPPC3-204ENST00000373166 K7EQD1 137 aa13.08□□□□□ -0.32
TRAPPC3-204ENST00000373166 M0R036 132 aa13.08□□□□□ -0.32
TRAPPC3-204ENST00000373166 RS1O15537 224 aa13.08□□□□□ -0.32
TRAPPC3-204ENST00000373166 CIDEAO60543 219 aa13.08□□□□□ -0.32
TRAPPC3-204ENST00000373166 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
TRAPPC3-204ENST00000373166 TRAV1-1A0A0B4J248 108 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 PGPEP1LA6NFU8 196 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 SULT1A2P50226 295 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 CRIP1P50238 77 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 CFAP126Q5VTH2 177 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 TXNDC17Q9BRA2 123 aa13.07□□□□□ -0.32
TRAPPC3-204ENST00000373166 KRBOX1C9JBD0 128 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 H3BVH4 76 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 NXPH4O95158 308 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 GATA1P15976 413 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 ZNF674Q2M3X9 581 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 NHLRC2Q8NBF2 726 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 IL36BQ9NZH7 164 aa13.06□□□□□ -0.32
TRAPPC3-204ENST00000373166 CCL20P78556 96 aa13.05□□□□□ -0.32
TRAPPC3-204ENST00000373166 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
TRAPPC3-204ENST00000373166 LYPD5Q6UWN5 251 aa13.05□□□□□ -0.32
TRAPPC3-204ENST00000373166 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
TRAPPC3-204ENST00000373166 A8MWV9 139 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 IFNA1P01562 189 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 KRTAP10-1P60331 282 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 RHOHQ15669 191 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 PIK3CD-AS1Q5SR53 167 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 DNLZQ5SXM8 178 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 SH2D6Q7Z4S9 175 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 BAGE2Q86Y30 109 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 SYT8Q8NBV8 401 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 PRADC1Q9BSG0 188 aa13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 SRRM2Q9UQ35 2752 aaKnown RBP13.04□□□□□ -0.32
TRAPPC3-204ENST00000373166 TMSB15BA0A087X1C1 80 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 IGHV3-73A0A0B4J1V6 119 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 LOC100131303A0A0U1RQF7 123 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 TRBV6-4A0A1B0GX49 114 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 MGST1P10620 155 aaKnown RBP13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
TRAPPC3-204ENST00000373166 A0A087WTM6 91 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 FAM229AH3BQW9 127 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 ARMS2P0C7Q2 107 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 C11orf52Q96A22 123 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 PARLQ9H300 379 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 TNFRSF18Q9Y5U5 241 aa13.02□□□□□ -0.33
TRAPPC3-204ENST00000373166 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms