RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 HERVK_113P63121 156 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 ARFGEF3Q5TH69 2177 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 K7EQD1 137 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 DAND5Q8N907 189 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 Q8N9W7 124 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 SMAD5-AS1Q9Y6J3 95 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 ATP5G1P05496 136 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 Q8N7P7 452 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 ATP6V0E2Q8NHE4 81 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 V9GYV3 84 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 I3L2K1 104 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 CTSGP08311 255 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 DEFB125Q8N687 156 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.61□□□□□ -1.19
COL4A6-202ENST00000372216 DIDO1Q9BTC0 2240 aaKnown RBP7.61□□□□□ -1.19
COL4A6-202ENST00000372216 C9JQL5 133 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 LTAP01374 205 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 FBXL19-AS1Q494R0 122 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 C4orf3Q8WVX3 66 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 IGLV11-55A0A075B6I3 123 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 DEFB1P60022 68 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 PRR20EP86478 221 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 PRR20CP86479 221 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 PRR20DP86480 221 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 PRR20BP86481 221 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 PRR20AP86496 221 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 MRPL23Q16540 153 aaKnown RBP7.61□□□□□ -1.19
COL4A6-202ENST00000372216 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
COL4A6-202ENST00000372216 RBAKDNA6NC62 111 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 HHLA3Q9XRX5 114 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 NDUFS6O75380 124 aaKnown RBP7.6□□□□□ -1.19
COL4A6-202ENST00000372216 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 FAM231DQ6ZW35 169 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 MRPL36Q9P0J6 103 aaKnown RBP7.6□□□□□ -1.19
COL4A6-202ENST00000372216 NCKAP5O14513 1909 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 CEP250Q9BV73 2442 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 TRAV13-2A0A0B4J235 113 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 RPL39LQ96EH5 51 aaKnown RBP7.6□□□□□ -1.19
COL4A6-202ENST00000372216 SIRPDQ9H106 197 aa7.6□□□□□ -1.19
COL4A6-202ENST00000372216 COX7A2LO14548 114 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 LY6G6CO95867 125 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 GPR179Q6PRD1 2367 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 DNAJC9-AS1A6NH13 148 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 NPYP01303 97 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 KIAA1549LQ6ZVL6 1849 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 K7EIM0 57 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.19
COL4A6-202ENST00000372216 TMEM131Q92545 1883 aa7.59□□□□□ -1.19
COL4A6-202ENST00000372216 MYCNOSP40205 109 aa7.59□□□□□ -1.2
COL4A6-202ENST00000372216 Q0VG73 95 aa7.59□□□□□ -1.2
COL4A6-202ENST00000372216 Q6ZSR3 168 aa7.59□□□□□ -1.2
COL4A6-202ENST00000372216 SIGLEC8Q9NYZ4 499 aa7.59□□□□□ -1.2
COL4A6-202ENST00000372216 GVINP1Q7Z2Y8 2422 aa7.59□□□□□ -1.2
COL4A6-202ENST00000372216 POLEQ07864 2286 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 A8MWP6 167 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 ZNF843Q8N446 348 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 MRPL52Q86TS9 123 aaKnown RBP7.58□□□□□ -1.2
COL4A6-202ENST00000372216 ORMDL1Q9P0S3 153 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 CRYBA4P53673 196 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 C16orf54Q6UWD8 224 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
COL4A6-202ENST00000372216 DOCK7Q96N67 2140 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 LRRC75A-AS1Q8N1F1 130 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 C11orf45Q8TAV5 145 aa7.58□□□□□ -1.2
COL4A6-202ENST00000372216 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 DENND4AQ7Z401 1863 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 IGHG2P01859 326 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 RBM3P98179 157 aaKnown RBP7.57□□□□□ -1.2
COL4A6-202ENST00000372216 MSMPQ1L6U9 139 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 NDUFB1O75438 58 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 LOXL1Q08397 574 aaPredicted RBP7.57□□□□□ -1.2
COL4A6-202ENST00000372216 RETNQ9HD89 108 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 DKK2Q9UBU2 259 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 USF3Q68DE3 2245 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 LECT2O14960 151 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 IGKV1-17P01599 117 aa7.57□□□□□ -1.2
COL4A6-202ENST00000372216 K7EN84 100 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 IGLL1P15814 213 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 C20orf78Q9BR46 151 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 A6NDX4 124 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 IGHV4-31P0DP07 118 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 FUSP35637 526 aaKnown RBP eCLIP7.56□□□□□ -1.2
COL4A6-202ENST00000372216 RNF152Q8N8N0 203 aa7.56□□□□□ -1.2
COL4A6-202ENST00000372216 A0A0J9YWU9 116 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 ACYP1P07311 99 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 C11orf52Q96A22 123 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 ODF3L1Q8IXM7 274 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 J3QQQ9 107 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 A0A087WZ39 114 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 SEC61GP60059 68 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms