RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SERTAD4-AS1Q5TG53 156 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 IGFL4Q6B9Z1 124 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 Q6ZR03 302 aa11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 Q6ZRM9 215 aa11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 DKK1O94907 266 aa11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 HOXB4P17483 251 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF1-202ENST00000372190 FHL1Q13642 323 aa11.08□□□□□ -0.63
RAPGEF1-202ENST00000372190 A0A1W2PNU3 283 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF1-202ENST00000372190 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZNF503-AS2A6NEH8 195 aa11.08□□□□□ -0.64
RAPGEF1-202ENST00000372190 OXLD1Q5BKU9 147 aa11.08□□□□□ -0.64
RAPGEF1-202ENST00000372190 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
RAPGEF1-202ENST00000372190 RMI2Q96E14 147 aa11.07□□□□□ -0.64
RAPGEF1-202ENST00000372190 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
RAPGEF1-202ENST00000372190 PLXND1Q9Y4D7 1925 aa11.07□□□□□ -0.64
RAPGEF1-202ENST00000372190 TEX36Q5VZQ5 186 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 LINC00205P59089 165 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 Q8N1Y9 231 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 IGLV3-9A0A075B6K5 115 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 BPY2O14599 106 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 LECT2O14960 151 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 OVOL3O00110 214 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 C11orf52Q96A22 123 aa11.06□□□□□ -0.64
RAPGEF1-202ENST00000372190 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 NRGNQ92686 78 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZNRD1Q9P1U0 126 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 CACNA1DQ01668 2161 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 FREM3P0C091 2139 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 MYLKQ15746 1914 aa11.05□□□□□ -0.64
RAPGEF1-202ENST00000372190 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 DKK4Q9UBT3 224 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 KIF26BQ2KJY2 2108 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 C16orf54Q6UWD8 224 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 ADAMTS9Q9P2N4 1935 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 TECTAO75443 2155 aa11.04□□□□□ -0.64
RAPGEF1-202ENST00000372190 RBX1P62877 108 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 IMUPQ9GZP8 106 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 HEATR1Q9H583 2144 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 COX7CP15954 63 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 H0Y9J4 135 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 CCDC179H3BU77 68 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 MED12Q93074 2177 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 ALPK2Q86TB3 2170 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 DAZAP2Q15038 168 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 MLANAQ16655 118 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 DEFB112Q30KQ8 113 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZNF726P1Q15940 193 aa11.02□□□□□ -0.64
RAPGEF1-202ENST00000372190 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 IGKV1-6A0A0C4DH72 117 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 PRR25Q96S07 402 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 A0A087WW49 117 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 BLCAPP62952 87 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 PIFOQ8TCI5 191 aa11.02□□□□□ -0.65
RAPGEF1-202ENST00000372190 NDUFB8O95169 186 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 IGKV1-16P04430 117 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 PAX9P55771 341 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 CGB7P0DN87 165 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 TDRG1Q3Y452 100 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 WDR86Q86TI4 376 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 VOPP1Q96AW1 172 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 SPRY4Q9C004 299 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 VPREB3Q9UKI3 123 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 FER1L5A0AVI2 2057 aa11.01□□□□□ -0.65
RAPGEF1-202ENST00000372190 LMO1P25800 156 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 G3V318 75 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 TCL1BO95988 128 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 ZMAT4Q9H898 229 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 CGB3P0DN86 165 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 DEFB131AP59861 70 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 ZNF524Q96C55 264 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 FAM120AOSQ5T036 256 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 MUC6Q6W4X9 2439 aa11□□□□□ -0.65
RAPGEF1-202ENST00000372190 RPL18AQ02543 176 aaKnown RBP11□□□□□ -0.65
RAPGEF1-202ENST00000372190 C17orf58Q2M2W7 97 aa10.99□□□□□ -0.65
RAPGEF1-202ENST00000372190 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
RAPGEF1-202ENST00000372190 ANGP03950 147 aaKnown RBP10.99□□□□□ -0.65
RAPGEF1-202ENST00000372190 APOC4P55056 127 aa10.99□□□□□ -0.65
RAPGEF1-202ENST00000372190 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms