RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
LDB3-204ENST00000372066 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
LDB3-204ENST00000372066 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 NXT2Q9NPJ8 142 aaKnown RBP10.56□□□□□ -0.72
LDB3-204ENST00000372066 EREGO14944 169 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 TCAPO15273 167 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 NPYP01303 97 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 PRR9Q5T870 116 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 DEFB125Q8N687 156 aa10.56□□□□□ -0.72
LDB3-204ENST00000372066 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 HBDP02042 147 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
LDB3-204ENST00000372066 ASIPP42127 132 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 SPANXN1Q5VSR9 72 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 MSRB1Q9NZV6 116 aa10.55□□□□□ -0.72
LDB3-204ENST00000372066 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
LDB3-204ENST00000372066 SNRPD3P62318 126 aaKnown RBP10.54□□□□□ -0.72
LDB3-204ENST00000372066 GAGE1Q13065 139 aa10.54□□□□□ -0.72
LDB3-204ENST00000372066 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
LDB3-204ENST00000372066 KLLNB2CW77 178 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 HSBP1L1C9JCN9 74 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 LEPP41159 167 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 SAMD5Q5TGI4 173 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 LINC00173Q6ZV60 143 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
LDB3-204ENST00000372066 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.72
LDB3-204ENST00000372066 H3BVH4 76 aa10.52□□□□□ -0.72
LDB3-204ENST00000372066 K7EQG2 157 aa10.52□□□□□ -0.72
LDB3-204ENST00000372066 TNFRSF6BO95407 300 aa10.52□□□□□ -0.72
LDB3-204ENST00000372066 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.72
LDB3-204ENST00000372066 KPRPQ5T749 579 aaPredicted RBP10.52□□□□□ -0.72
LDB3-204ENST00000372066 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.72
LDB3-204ENST00000372066 IGHV4OR15-8A0A075B7B6 117 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 A0A087WW49 117 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 A0A096LNJ9 63 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 NCR2O95944 276 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
LDB3-204ENST00000372066 IGKV3-7A0A075B6H7 116 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 DUSP14O95147 198 aaKnown RBP10.51□□□□□ -0.73
LDB3-204ENST00000372066 HOXD3P31249 432 aaPredicted RBP10.51□□□□□ -0.73
LDB3-204ENST00000372066 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
LDB3-204ENST00000372066 ZNF124Q15973 351 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 LGALS9BQ3B8N2 356 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 ANXA2RQ3ZCQ2 193 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 LGALS9CQ6DKI2 356 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 Q8N8P6 123 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
LDB3-204ENST00000372066 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 F6UB75 175 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 IGLL1P15814 213 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
LDB3-204ENST00000372066 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 Q6ZN92 141 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 DPF1Q92782 380 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 DPH3P1Q9H4G8 78 aa10.5□□□□□ -0.73
LDB3-204ENST00000372066 MRPS16Q9Y3D3 137 aaKnown RBP10.5□□□□□ -0.73
LDB3-204ENST00000372066 A0A0J9YX75 114 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 NXPH4O95158 308 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 PPP1R17O96001 155 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 EVI2AP22794 236 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 FCER1GP30273 86 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 TSPOP30536 169 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 C4orf3Q8WVX3 66 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
LDB3-204ENST00000372066 M0R381 172 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 CD28P10747 220 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 EDN2P20800 178 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 PSMG4Q5JS54 123 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 FAM159AQ6UWV7 190 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 PEMTQ9UBM1 199 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 C7orf71A4D174 169 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 LINC01619G3V211 115 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 J3KRW8 73 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 K7EMI3 77 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 NRACQ8N912 160 aa10.48□□□□□ -0.73
LDB3-204ENST00000372066 IGLV2-18A0A075B6J9 118 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 ZNF688P0C7X2 276 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 DEFB1P60022 68 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 MAJINQ3KP22 176 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 COL5A1-AS1Q5SY13 56 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 FOXI2Q6ZQN5 318 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 Q6ZQT7 251 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
LDB3-204ENST00000372066 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
LDB3-204ENST00000372066 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms