RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 EXPH5Q8NEV8 1989 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 NCKAP5O14513 1909 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 VCYO14598 125 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 SS18L1O75177 396 aaPredicted RBP9.19□□□□□ -0.94
PTPN1-201ENST00000371621 GFRALQ6UXV0 394 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
PTPN1-201ENST00000371621 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 IGKV1D-37A0A075B6S9 117 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 C16orf97H3BN30 126 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
PTPN1-201ENST00000371621 MYO18BQ8IUG5 2567 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 M0R1W7 72 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 ZNF80P51504 273 aaPredicted RBP9.18□□□□□ -0.94
PTPN1-201ENST00000371621 TEX36Q5VZQ5 186 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 PEMTQ9UBM1 199 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 NBR2O15453 112 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 RHOHQ15669 191 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 NDUFA7O95182 113 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 IGHG4P01861 327 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 C1orf162Q8NEQ5 155 aaPredicted RBP9.18□□□□□ -0.94
PTPN1-201ENST00000371621 TMEM131Q92545 1883 aa9.18□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV1-3A0A0C4DH29 117 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 NSUN5P1Q3KNT7 163 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 POU2AF1Q16633 256 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 PDE6HQ13956 83 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
PTPN1-201ENST00000371621 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
PTPN1-201ENST00000371621 WI2-2373I1.2A0A1W2PRP0 233 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 K7EM74 188 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 RNF152Q8N8N0 203 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 UQCRQO14949 82 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 BAALC-AS2P0C853 105 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 TMEM14CQ9P0S9 112 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
PTPN1-201ENST00000371621 A0A0J9YXV3 536 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
PTPN1-201ENST00000371621 DSCR8Q96T75 97 aa9.16□□□□□ -0.94
PTPN1-201ENST00000371621 PRAC2D3DTV9 90 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 H3BRN7 92 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV1-8P0DP01 117 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 KRTAP27-1Q3LI81 207 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
PTPN1-201ENST00000371621 UBE2E1P51965 193 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 Q6ZS46 218 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 TMEM105Q8N8V8 129 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 FDCSPQ8NFU4 85 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
PTPN1-201ENST00000371621 CRYGCP07315 174 aa9.15□□□□□ -0.95
PTPN1-201ENST00000371621 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.95
PTPN1-201ENST00000371621 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.95
PTPN1-201ENST00000371621 CENPVL3A0A0U1RRI6 287 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 ATG2AQ2TAZ0 1938 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 DKK1O94907 266 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 GNRH2O43555 120 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 CRYGBP07316 175 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 EIF4EBP1Q13541 118 aaPredicted RBP9.14□□□□□ -0.95
PTPN1-201ENST00000371621 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 PHLDA1Q8WV24 401 aaPredicted RBP9.14□□□□□ -0.95
PTPN1-201ENST00000371621 DNAJC30Q96LL9 226 aa9.14□□□□□ -0.95
PTPN1-201ENST00000371621 A0A0J9YY99 117 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 INAFM2P0DMQ5 153 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 RNF138Q8WVD3 245 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 DEFB1P60022 68 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 WFDC11Q8NEX6 87 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 C7orf69Q9H7B7 122 aa9.13□□□□□ -0.95
PTPN1-201ENST00000371621 ZNF71Q9NQZ8 489 aaPredicted RBP9.13□□□□□ -0.95
PTPN1-201ENST00000371621 ZNF833PQ6ZTB9 187 aa9.12□□□□□ -0.95
PTPN1-201ENST00000371621 LGALS9O00182 355 aa9.12□□□□□ -0.95
PTPN1-201ENST00000371621 ATOX1O00244 68 aa9.12□□□□□ -0.95
PTPN1-201ENST00000371621 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
PTPN1-201ENST00000371621 LINC00158P58513 81 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 TRIAP1O43715 76 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 TET2Q6N021 2002 aaPredicted RBP9.11□□□□□ -0.95
PTPN1-201ENST00000371621 F6UB75 175 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 PAX4O43316 350 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 BSPH1Q075Z2 132 aa9.11□□□□□ -0.95
PTPN1-201ENST00000371621 RUSC1-AS1Q66K80 236 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms