RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 F5H697 171 aa8.9□□□□□ -0.99
PDE6C-201ENST00000371447 C7orf71A4D174 169 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 HBDP02042 147 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 SLC25A34Q6PIV7 304 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 ZNF493Q6ZR52 646 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 TMEM190Q8WZ59 177 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 TMEM158Q8WZ71 300 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 A0A087WWL8 130 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 PRM2P04554 102 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 U3KQE9 123 aa8.89□□□□□ -0.99
PDE6C-201ENST00000371447 LINC01559Q495D7 138 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 C19orf54Q5BKX5 351 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 ZNF479Q96JC4 524 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 NAA38Q9BRA0 125 aaKnown RBP8.88□□□□□ -0.99
PDE6C-201ENST00000371447 RPL39LQ96EH5 51 aaKnown RBP8.88□□□□□ -0.99
PDE6C-201ENST00000371447 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 KLK9Q9UKQ9 250 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 PET117Q6UWS5 81 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 FOXC2Q99958 501 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 SMPXQ9UHP9 88 aa8.88□□□□□ -0.99
PDE6C-201ENST00000371447 CD7P09564 240 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 ZFAND2AQ8N6M9 145 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 OR2K2Q8NGT1 345 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 TMEM8BA6NDV4 472 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 SLC25A16P16260 332 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 TMEM160Q9NX00 188 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 IGHV4OR15-8A0A075B7B6 117 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 A0A087WW49 117 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 ASIPP42127 132 aa8.87□□□□□ -0.99
PDE6C-201ENST00000371447 TRAV21A0A0B4J279 112 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 SLURP1P55000 103 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 SAP30O75446 220 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 IGLV1-40P01703 118 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 GTSF1LQ9H1H1 148 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
PDE6C-201ENST00000371447 K7EMI3 77 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 PCP2Q8IVA1 136 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 GTSCR1Q86UQ5 136 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 WFDC11Q8NEX6 87 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 OVOL1O14753 267 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 LINC01545Q5VT33 79 aa8.85□□□□□ -0.99
PDE6C-201ENST00000371447 IGHV3-73A0A0B4J1V6 119 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 PSMB8P28062 276 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 HOXD3P31249 432 aaPredicted RBP8.84□□□□□ -0.99
PDE6C-201ENST00000371447 EMP1P54849 157 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
PDE6C-201ENST00000371447 SMIM17P0DL12 118 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 ID1P41134 155 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 DSCR9P59020 149 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 CKS1BP61024 79 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
PDE6C-201ENST00000371447 U3KQK5 164 aa8.83□□□□□ -1
PDE6C-201ENST00000371447 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
PDE6C-201ENST00000371447 RAB37Q96AX2 223 aa8.83□□□□□ -1
PDE6C-201ENST00000371447 SOCS3O14543 225 aa8.83□□□□□ -1
PDE6C-201ENST00000371447 DEFB113Q30KQ7 82 aa8.83□□□□□ -1
PDE6C-201ENST00000371447 TRAV8-6A0A0B4J262 113 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 MDFICQ9P1T7 246 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 DPF1Q92782 380 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 ATP6V0BQ99437 205 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 CD5LO43866 347 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 GATA3P23771 443 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 ZC2HC1BQ5TFG8 222 aa8.82□□□□□ -1
PDE6C-201ENST00000371447 ZNF256Q9Y2P7 627 aaPredicted RBP8.82□□□□□ -1
PDE6C-201ENST00000371447 SNRPD3P62318 126 aaKnown RBP8.81□□□□□ -1
PDE6C-201ENST00000371447 OR11H1Q8NG94 326 aa8.81□□□□□ -1
PDE6C-201ENST00000371447 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
PDE6C-201ENST00000371447 NXT2Q9NPJ8 142 aaKnown RBP8.81□□□□□ -1
PDE6C-201ENST00000371447 GCN1Q92616 2671 aaKnown RBP8.81□□□□□ -1
PDE6C-201ENST00000371447 MUC4Q99102 2169 aa8.81□□□□□ -1
PDE6C-201ENST00000371447 IGHV3OR16-12A0A075B7B8 117 aa8.81□□□□□ -1
PDE6C-201ENST00000371447 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
PDE6C-201ENST00000371447 DCANP1Q8TF63 244 aa8.81□□□□□ -1
PDE6C-201ENST00000371447 MRPS16Q9Y3D3 137 aaKnown RBP8.81□□□□□ -1
PDE6C-201ENST00000371447 FCER1GP30273 86 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 UNC79Q9P2D8 2635 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 IGKV2D-26A0A0A0MRZ7 120 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 SIVA1O15304 175 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 RNASE3P12724 160 aaKnown RBP8.8□□□□□ -1
PDE6C-201ENST00000371447 DEFB131AP59861 70 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 CFHR3Q02985 330 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 LAGE3Q14657 143 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 GATD1Q8NB37 220 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 MRPL53Q96EL3 112 aaKnown RBP8.8□□□□□ -1
PDE6C-201ENST00000371447 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
PDE6C-201ENST00000371447 A0A096LNT2 108 aa8.8□□□□□ -1
PDE6C-201ENST00000371447 H3BUA1 57 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms