RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NUDT3O95989 172 aa10.41□□□□□ -0.74
COL9A1-204ENST00000370496 SFTA3P0C7M3 94 aa10.41□□□□□ -0.74
COL9A1-204ENST00000370496 OR4C5Q8NGB2 326 aa10.41□□□□□ -0.74
COL9A1-204ENST00000370496 MUC4Q99102 2169 aa10.41□□□□□ -0.74
COL9A1-204ENST00000370496 NDUFS6O75380 124 aaKnown RBP10.4□□□□□ -0.74
COL9A1-204ENST00000370496 ARMS2P0C7Q2 107 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 DNLZQ5SXM8 178 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 LGALS9CQ6DKI2 356 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 SMIM7Q9BQ49 75 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
COL9A1-204ENST00000370496 P01737 135 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 CXCL1P09341 107 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 P0DMU3 169 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 M0R381 172 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 SRP19P09132 144 aaKnown RBP10.39□□□□□ -0.75
COL9A1-204ENST00000370496 SLAQ13239 276 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 PTH2Q96A98 100 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
COL9A1-204ENST00000370496 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 ZNF727A8MUV8 499 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 H3BNG1 76 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 PAX4O43316 350 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 MED14OSP0DP75 135 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 FHL2Q14192 279 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 PEA15Q15121 130 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 ZFP82Q8N141 532 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
COL9A1-204ENST00000370496 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 XKRY2A2RUG3 117 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 A8MWV9 139 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 K7EN84 100 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 RS1O15537 224 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 RPS20P60866 119 aaKnown RBP10.37□□□□□ -0.75
COL9A1-204ENST00000370496 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 HHLA3Q9XRX5 114 aa10.37□□□□□ -0.75
COL9A1-204ENST00000370496 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
COL9A1-204ENST00000370496 CRYBA4P53673 196 aa10.36□□□□□ -0.75
COL9A1-204ENST00000370496 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
COL9A1-204ENST00000370496 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
COL9A1-204ENST00000370496 SCRT2Q9NQ03 307 aa10.36□□□□□ -0.75
COL9A1-204ENST00000370496 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
COL9A1-204ENST00000370496 CIDEAO60543 219 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 GZMBP10144 247 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 SRSF3P84103 164 aaKnown RBP10.35□□□□□ -0.75
COL9A1-204ENST00000370496 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 SMDT1Q9H4I9 107 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
COL9A1-204ENST00000370496 LY96Q9Y6Y9 160 aa10.35□□□□□ -0.75
COL9A1-204ENST00000370496 SNAI2O43623 268 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 FAM74A4Q5TZK3 123 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 ZNF575Q86XF7 245 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
COL9A1-204ENST00000370496 SACSQ9NZJ4 4579 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 C9JQL5 133 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 RHODO00212 210 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 GATA1P15976 413 aaPredicted RBP10.33□□□□□ -0.76
COL9A1-204ENST00000370496 CCL18P55774 89 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 ERVFC1-1P60608 527 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 IFITM2Q01629 132 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 JPT2Q9H910 190 aa10.33□□□□□ -0.76
COL9A1-204ENST00000370496 DNAH1Q9P2D7 4330 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 NXPH4O95158 308 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 GYPEP15421 78 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 SRIP30626 198 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 RHOHQ15669 191 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 RNF212Q495C1 297 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 ZFP2Q6ZN57 461 aa10.32□□□□□ -0.76
COL9A1-204ENST00000370496 A0A087WWL8 130 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 A0A096LPF7 62 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
COL9A1-204ENST00000370496 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 SSTP61278 116 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 ADIRFQ15847 76 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
COL9A1-204ENST00000370496 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 FAM231DQ6ZW35 169 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 SFRP2Q96HF1 295 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 SSBP4Q9BWG4 385 aaPredicted RBP10.31□□□□□ -0.76
COL9A1-204ENST00000370496 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
COL9A1-204ENST00000370496 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms