RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.83
HCFC1-202ENST00000369984 ZNF726P1Q15940 193 aa9.9□□□□□ -0.83
HCFC1-202ENST00000369984 EXPH5Q8NEV8 1989 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 FXYD5Q96DB9 178 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 LTBP1Q14766 1721 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 C17orf58Q2M2W7 97 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
HCFC1-202ENST00000369984 UNQ6494/PRO21346Q6UXR6 183 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
HCFC1-202ENST00000369984 IGLL5B9A064 214 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 NREPQ16612 68 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 Q96MF0 132 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 LMO1P25800 156 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
HCFC1-202ENST00000369984 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
HCFC1-202ENST00000369984 IGHV4OR15-8A0A075B7B6 117 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 A0A087WW49 117 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 Q9H8V8 135 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 IGHV2-5P01817 119 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 CUL9Q8IWT3 2517 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 COL4A6Q14031 1691 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
HCFC1-202ENST00000369984 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
HCFC1-202ENST00000369984 COX7B2Q8TF08 81 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 K7EMI3 77 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 RHOHQ15669 191 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 J3QKU1 62 aa9.87□□□□□ -0.83
HCFC1-202ENST00000369984 MRPL36Q9P0J6 103 aaKnown RBP9.87□□□□□ -0.83
HCFC1-202ENST00000369984 LTAP01374 205 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 UBE2AP49459 152 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 TPSG1Q9NRR2 321 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 FOXL2NBQ6ZUU3 175 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 Q6ZVH6 145 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 IGHV7-4-1A0A0J9YVY3 117 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 K7EN84 100 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 FOXE3Q13461 319 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
HCFC1-202ENST00000369984 ETV2O00321 342 aaPredicted RBP9.85□□□□□ -0.83
HCFC1-202ENST00000369984 KIR2DL5BA0A0G2JN68 375 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 KIR2DL5BA0A0G2JPC4 375 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 CFC1BP0CG36 223 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 CFC1P0CG37 223 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 KIR2DL5AQ8N109 375 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 WT1-ASQ06250 92 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 Q8TCH9 128 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 IGKV1OR2-108A0A075B7D4 117 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 HERV-K104P63124 156 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 Q6ZQT7 251 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 GNRH2O43555 120 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 LYPD6Q86Y78 171 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 PCP2Q8IVA1 136 aa9.85□□□□□ -0.83
HCFC1-202ENST00000369984 KLF2Q9Y5W3 355 aaPredicted RBP9.85□□□□□ -0.83
HCFC1-202ENST00000369984 H0Y9J4 135 aa9.84□□□□□ -0.83
HCFC1-202ENST00000369984 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.84□□□□□ -0.83
HCFC1-202ENST00000369984 CRYGBP07316 175 aa9.84□□□□□ -0.83
HCFC1-202ENST00000369984 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
HCFC1-202ENST00000369984 LINC01620Q4KN68 170 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 Q9HAA7 133 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 Q6ZS92 163 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 DEFB125Q8N687 156 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 C17orf82Q86X59 251 aaPredicted RBP9.83□□□□□ -0.84
HCFC1-202ENST00000369984 K7EM74 188 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 FOXI2Q6ZQN5 318 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 THSD7BQ9C0I4 1608 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 A0A0J9YY99 117 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 ICOSQ9Y6W8 199 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
HCFC1-202ENST00000369984 Q71RC1 249 aaPredicted RBP9.83□□□□□ -0.84
HCFC1-202ENST00000369984 SP5Q6BEB4 398 aaPredicted RBP9.82□□□□□ -0.84
HCFC1-202ENST00000369984 FAM240AA0A1B0GVK7 77 aa9.82□□□□□ -0.84
HCFC1-202ENST00000369984 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
HCFC1-202ENST00000369984 PRR30Q53SZ7 412 aaPredicted RBP9.81□□□□□ -0.84
HCFC1-202ENST00000369984 RBAKDNA6NC62 111 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 C11orf52Q96A22 123 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 C15orf65H3BRN8 121 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 IL17DQ8TAD2 202 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 SEM1Q6ZVN7 128 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 TRAV4A0A0B4J268 109 aa9.81□□□□□ -0.84
HCFC1-202ENST00000369984 TRAV23DV6A0A075B6W5 121 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
HCFC1-202ENST00000369984 J3QLI3 93 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 LINC00311Q8N616 119 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms