RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 IFI27P40305 119 aaPredicted RBP12.87□□□□□ -0.35
UBE3D-203ENST00000369747 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 NDUFAF3Q9BU61 184 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 SIGLEC8Q9NYZ4 499 aa12.87□□□□□ -0.35
UBE3D-203ENST00000369747 CKS2P33552 79 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-203ENST00000369747 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 SORL1Q92673 2214 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 NCR2O95944 276 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 NPYP01303 97 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 FA2HQ7L5A8 372 aa12.86□□□□□ -0.35
UBE3D-203ENST00000369747 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
UBE3D-203ENST00000369747 LOC389332A0A1B0GUA5 103 aa12.85□□□□□ -0.35
UBE3D-203ENST00000369747 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
UBE3D-203ENST00000369747 TFPI2P48307 235 aa12.85□□□□□ -0.35
UBE3D-203ENST00000369747 TMEM70Q9BUB7 260 aa12.85□□□□□ -0.35
UBE3D-203ENST00000369747 H3BVH4 76 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 K7EQG2 157 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 AGRNO00468 2067 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-203ENST00000369747 GAS8-AS1O95177 125 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 ZNF688P0C7X2 276 aa12.84□□□□□ -0.35
UBE3D-203ENST00000369747 KLLNB2CW77 178 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 EVI2AP22794 236 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 CACNG7P62955 275 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 PSMG4Q5JS54 123 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
UBE3D-203ENST00000369747 DNHD1Q96M86 4753 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 SYS1-DBNDD2H3BUS1 97 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 IGLV1-51P01701 117 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 PPBPP02775 128 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 A0A096LNJ9 63 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 SPANXN1Q5VSR9 72 aa12.82□□□□□ -0.36
UBE3D-203ENST00000369747 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
UBE3D-203ENST00000369747 A0A0J9YX75 114 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 LAMTOR2Q9Y2Q5 125 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
UBE3D-203ENST00000369747 IGLL1P15814 213 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
UBE3D-203ENST00000369747 ASIPP42127 132 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
UBE3D-203ENST00000369747 GNRH2O43555 120 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 TNFRSF6BO95407 300 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 MED14OSP0DP75 135 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 MAP1LC3CQ9BXW4 147 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 SCRT2Q9NQ03 307 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 MUC4Q99102 2169 aa12.79□□□□□ -0.36
UBE3D-203ENST00000369747 SPRY2O43597 315 aa12.78□□□□□ -0.36
UBE3D-203ENST00000369747 S100A4P26447 101 aaKnown RBP12.78□□□□□ -0.36
UBE3D-203ENST00000369747 MAP1LC3AQ9H492 121 aa12.78□□□□□ -0.36
UBE3D-203ENST00000369747 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
UBE3D-203ENST00000369747 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
UBE3D-203ENST00000369747 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-203ENST00000369747 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
UBE3D-203ENST00000369747 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
UBE3D-203ENST00000369747 PET117Q6UWS5 81 aa12.77□□□□□ -0.37
UBE3D-203ENST00000369747 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.37
UBE3D-203ENST00000369747 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 LEPP41159 167 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 INSL3P51460 131 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 FXYD7P58549 80 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 ZNF705AQ6ZN79 300 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-203ENST00000369747 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 M0R381 172 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 NRACQ8N912 160 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 MCRIP2Q9BUT9 160 aaKnown RBP12.76□□□□□ -0.37
UBE3D-203ENST00000369747 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
UBE3D-203ENST00000369747 TRAV12-3A0A0B4J271 114 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 C20orf202A1L168 122 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 C7orf71A4D174 169 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 IGKV3-20P01619 116 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 OXLD1Q5BKU9 147 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 OR2K2Q8NGT1 345 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 MGAM2Q2M2H8 2515 aa12.75□□□□□ -0.37
UBE3D-203ENST00000369747 HBDP02042 147 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 IGLC3P0DOY3 106 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 NXT2Q9NPJ8 142 aaKnown RBP12.74□□□□□ -0.37
UBE3D-203ENST00000369747 NOTCH1P46531 2555 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 IGLV2-18A0A075B6J9 118 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 H0Y8G0 127 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 EREGO14944 169 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms