RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZDBF2Q9HCK1 2354 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 RPL39P62891 51 aaKnown RBP14.16□□□□□ -0.14
SNX27-202ENST00000368841 C14orf132Q9NPU4 83 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 LINC00173Q6ZV60 143 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 CCL18P55774 89 aa14.15□□□□□ -0.14
SNX27-202ENST00000368841 ATP6V0E2Q8NHE4 81 aa14.15□□□□□ -0.14
SNX27-202ENST00000368841 SS18L2Q9UHA2 77 aa14.15□□□□□ -0.14
SNX27-202ENST00000368841 KIF26AQ9ULI4 1882 aaPredicted RBP14.15□□□□□ -0.14
SNX27-202ENST00000368841 ZFP36P26651 326 aaKnown RBP14.15□□□□□ -0.14
SNX27-202ENST00000368841 ZFP2Q6ZN57 461 aa14.15□□□□□ -0.14
SNX27-202ENST00000368841 IGLL5B9A064 214 aa14.14□□□□□ -0.15
SNX27-202ENST00000368841 C16orf74Q96GX8 76 aa14.14□□□□□ -0.15
SNX27-202ENST00000368841 LRCOL1A6NCL2 159 aa14.14□□□□□ -0.15
SNX27-202ENST00000368841 GAGE12HA6NDE8 117 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 COX7A2LO14548 114 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 PYGO2Q9BRQ0 406 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 RNF183Q96D59 192 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 C20orf78Q9BR46 151 aa14.13□□□□□ -0.15
SNX27-202ENST00000368841 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
SNX27-202ENST00000368841 C20orf144Q9BQM9 153 aa14.12□□□□□ -0.15
SNX27-202ENST00000368841 SH2D6Q7Z4S9 175 aa14.12□□□□□ -0.15
SNX27-202ENST00000368841 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
SNX27-202ENST00000368841 C11orf53Q8IXP5 236 aa14.12□□□□□ -0.15
SNX27-202ENST00000368841 IGHV7-81A0A0B4J1V7 117 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 ZNF493Q6ZR52 646 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 PRAC2D3DTV9 90 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 SPART-AS1P0CW21 52 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 HHLA3Q9XRX5 114 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 CFC1BP0CG36 223 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 CFC1P0CG37 223 aa14.11□□□□□ -0.15
SNX27-202ENST00000368841 FGF23Q9GZV9 251 aaPredicted RBP14.1□□□□□ -0.15
SNX27-202ENST00000368841 FANCD2OSQ96PS1 177 aa14.1□□□□□ -0.15
SNX27-202ENST00000368841 SND1-IT1Q9HBX3 110 aa14.1□□□□□ -0.15
SNX27-202ENST00000368841 Q8N1Y9 231 aa14.1□□□□□ -0.15
SNX27-202ENST00000368841 RNF138Q8WVD3 245 aa14.09□□□□□ -0.15
SNX27-202ENST00000368841 EML6Q6ZMW3 1958 aa14.09□□□□□ -0.15
SNX27-202ENST00000368841 A0A0J9YXV3 536 aa14.08□□□□□ -0.15
SNX27-202ENST00000368841 TRBV12-3P01733 135 aa14.08□□□□□ -0.15
SNX27-202ENST00000368841 CFPP27918 469 aa14.08□□□□□ -0.16
SNX27-202ENST00000368841 ATP5G1P05496 136 aa14.08□□□□□ -0.16
SNX27-202ENST00000368841 MRPL23Q16540 153 aaKnown RBP14.08□□□□□ -0.16
SNX27-202ENST00000368841 ADAMTS9Q9P2N4 1935 aa14.08□□□□□ -0.16
SNX27-202ENST00000368841 TM2D2Q9BX73 214 aa14.08□□□□□ -0.16
SNX27-202ENST00000368841 NACAE9PAV3 2078 aa14.08□□□□□ -0.16
SNX27-202ENST00000368841 CLEC2BQ92478 149 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 NLRC5Q86WI3 1866 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 C8orf31Q8N9H6 132 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 ZNF407Q9C0G0 2248 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 C11orf52Q96A22 123 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 HIGD2BQ4VC39 106 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 SPTBN1Q01082 2364 aaKnown RBP14.07□□□□□ -0.16
SNX27-202ENST00000368841 TTTY13Q9BZ97 58 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 KLK12Q9UKR0 248 aa14.07□□□□□ -0.16
SNX27-202ENST00000368841 FUSP35637 526 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX27-202ENST00000368841 ADORA2A-AS1P86434 159 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 MRPL36Q9P0J6 103 aaKnown RBP14.06□□□□□ -0.16
SNX27-202ENST00000368841 IGKV2-24A0A0C4DH68 120 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 VSIG2Q96IQ7 327 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 PRR20EP86478 221 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 PRR20CP86479 221 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 PRR20DP86480 221 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 PRR20BP86481 221 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 PRR20AP86496 221 aa14.06□□□□□ -0.16
SNX27-202ENST00000368841 C5orf56Q8N8D9 126 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 ZNF747Q9BV97 191 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 H3BUA1 57 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 I3L2K1 104 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 H0Y9J4 135 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 OPRPNQ99935 248 aaPredicted RBP14.05□□□□□ -0.16
SNX27-202ENST00000368841 PRSS47A8MTI9 375 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 CEMP1Q6PRD7 247 aaPredicted RBP14.05□□□□□ -0.16
SNX27-202ENST00000368841 USF3Q68DE3 2245 aa14.05□□□□□ -0.16
SNX27-202ENST00000368841 DEFB125Q8N687 156 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 PIP4P1Q86T03 277 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 TMEM61Q8N0U2 210 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 A0A096LNI7 61 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 P0DMU3 169 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 FAM231AP0DMU4 169 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 FAM231CP0DMU5 169 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 C4orf48Q5BLP8 95 aa14.04□□□□□ -0.16
SNX27-202ENST00000368841 C2orf70A6NJV1 201 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 B5MCH6 92 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 NUPR1O60356 82 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 GTSF1Q8WW33 167 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 K7EIM0 57 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 PLA2G5P39877 138 aa14.03□□□□□ -0.16
SNX27-202ENST00000368841 SRSF2Q01130 221 aaKnown RBP14.02□□□□□ -0.16
SNX27-202ENST00000368841 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.16
SNX27-202ENST00000368841 ETV2O00321 342 aaPredicted RBP14.02□□□□□ -0.17
SNX27-202ENST00000368841 HERV-K104P63124 156 aa14.02□□□□□ -0.17
SNX27-202ENST00000368841 DAZ2Q13117 558 aaKnown RBP14.02□□□□□ -0.17
SNX27-202ENST00000368841 DAZ4Q86SG3 579 aaKnown RBP14.02□□□□□ -0.17
SNX27-202ENST00000368841 DAZ3Q9NR90 486 aaKnown RBP14.02□□□□□ -0.17
SNX27-202ENST00000368841 KAAG1Q9UBP8 84 aa14.02□□□□□ -0.17
SNX27-202ENST00000368841 GTF3C1Q12789 2109 aa14.02□□□□□ -0.17
SNX27-202ENST00000368841 CACNA1BQ00975 2339 aa14.02□□□□□ -0.17
SNX27-202ENST00000368841 A4D1N5 150 aa14.01□□□□□ -0.17
SNX27-202ENST00000368841 C16orf54Q6UWD8 224 aa14.01□□□□□ -0.17
SNX27-202ENST00000368841 Q8N9W7 124 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms