RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 A0A1W2PPQ1 181 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 GAGE7O76087 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 S100PP25815 95 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 SAPCD1Q5SSQ6 148 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 ALMS1Q8TCU4 4167 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 GNRH2O43555 120 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 YPEL4Q96NS1 127 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 APLNQ9ULZ1 77 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 ZFP30Q9Y2G7 519 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 V9GYV3 84 aa10.65□□□□□ -0.7
SMPDL3A-201ENST00000368440 RYR3Q15413 4870 aa10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 TYMSP04818 313 aa10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 PFN1P07737 140 aaKnown RBP10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 DAZAP1Q96EP5 407 aaKnown RBP10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
SMPDL3A-201ENST00000368440 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 TRGV1A0A0A0MS02 117 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 SPINK4O60575 86 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 RAB5AP20339 215 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 CRIP1P50238 77 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 KCNIP4Q6PIL6 250 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 SMIM12Q96EX1 92 aa10.63□□□□□ -0.71
SMPDL3A-201ENST00000368440 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 P01737 135 aa10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 ATP5G1P05496 136 aa10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 IL36BQ9NZH7 164 aa10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 DNAH1Q9P2D7 4330 aa10.62□□□□□ -0.71
SMPDL3A-201ENST00000368440 COX8CQ7Z4L0 72 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 FAM210BQ96KR6 192 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 BIN3Q9NQY0 253 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 RYR2Q92736 4967 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 F5H768 121 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
SMPDL3A-201ENST00000368440 IGKV3D-20A0A0C4DH25 116 aa10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 C19orf71A6NCJ1 209 aa10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 SH2D1AO60880 128 aa10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 HOXA5P20719 270 aa10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
SMPDL3A-201ENST00000368440 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 FABP5P3A8MUU1 101 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 LY6G6CO95867 125 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 GZMBP10144 247 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 TCTAP57738 103 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 OR2D3Q8NGH3 330 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 NDUFAF3Q9BU61 184 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
SMPDL3A-201ENST00000368440 FAM162BQ5T6X4 162 aa10.58□□□□□ -0.72
SMPDL3A-201ENST00000368440 IMMP2LQ96T52 175 aa10.58□□□□□ -0.72
SMPDL3A-201ENST00000368440 SPXQ9BT56 116 aa10.58□□□□□ -0.72
SMPDL3A-201ENST00000368440 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 IGHV3-53P01767 116 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 MUC4Q99102 2169 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 SMIM27A0A1W2PRY6 76 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 ORM1P02763 201 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
SMPDL3A-201ENST00000368440 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
SMPDL3A-201ENST00000368440 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
SMPDL3A-201ENST00000368440 RASL10AQ92737 203 aa10.56□□□□□ -0.72
SMPDL3A-201ENST00000368440 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
SMPDL3A-201ENST00000368440 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
SMPDL3A-201ENST00000368440 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 A8MWL6 223 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 M0R2P5 195 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 PGLYRP4Q96LB8 373 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 VPS13DQ5THJ4 4388 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 TRAV26-1A0A087WT03 109 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 A0A0J9YY99 117 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 TRGC2P03986 189 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 SSTP61278 116 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 BTF3L4Q96K17 158 aa10.55□□□□□ -0.72
SMPDL3A-201ENST00000368440 NACAE9PAV3 2078 aa10.54□□□□□ -0.72
SMPDL3A-201ENST00000368440 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms