RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RTTNQ86VV8 2226 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 I3L2K1 104 aa12.19□□□□□ -0.46
NUCKS1-201ENST00000367142 RPL39LQ96EH5 51 aaKnown RBP12.19□□□□□ -0.46
NUCKS1-201ENST00000367142 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
NUCKS1-201ENST00000367142 H3BMG7 143 aa12.19□□□□□ -0.46
NUCKS1-201ENST00000367142 K7EMT4 169 aa12.19□□□□□ -0.46
NUCKS1-201ENST00000367142 K7EP13 123 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 RNF183Q96D59 192 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 SPRY2O43597 315 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 IGFBPL1Q8WX77 278 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 Q6ZVH6 145 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 C14orf132Q9NPU4 83 aa12.18□□□□□ -0.46
NUCKS1-201ENST00000367142 DEFB4AO15263 64 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 FREM3P0C091 2139 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 KIF26BQ2KJY2 2108 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 LRRK1Q38SD2 2015 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 K7EN84 100 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 RSPO1Q2MKA7 263 aaPredicted RBP12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 WT1P19544 449 aaPredicted RBP12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 DIRC1Q969H9 104 aa12.17□□□□□ -0.46
NUCKS1-201ENST00000367142 BAALCQ8WXS3 180 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 FAM186AA6NE01 2351 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 IGLV3-1P01715 115 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 C11orf45Q8TAV5 145 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 K7EIM0 57 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 CTSGP08311 255 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 Q8N9W7 124 aa12.16□□□□□ -0.46
NUCKS1-201ENST00000367142 Q8N1Y9 231 aa12.15□□□□□ -0.46
NUCKS1-201ENST00000367142 SPRNQ5BIV9 151 aa12.15□□□□□ -0.46
NUCKS1-201ENST00000367142 PROP1O75360 226 aa12.15□□□□□ -0.46
NUCKS1-201ENST00000367142 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 MYO7BQ6PIF6 2116 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 TICRRQ7Z2Z1 1910 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 H0Y9J4 135 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 ZFP36P26651 326 aaKnown RBP12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 MUSTN1Q8IVN3 82 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
NUCKS1-201ENST00000367142 KIAA1671Q9BY89 1806 aa12.13□□□□□ -0.47
NUCKS1-201ENST00000367142 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
NUCKS1-201ENST00000367142 FGF23Q9GZV9 251 aaPredicted RBP12.13□□□□□ -0.47
NUCKS1-201ENST00000367142 CACNA1EQ15878 2313 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 TMEM263Q8WUH6 116 aaKnown RBP12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 RITA1Q96K30 269 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 PSMB8P28062 276 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 HIGD2BQ4VC39 106 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
NUCKS1-201ENST00000367142 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
NUCKS1-201ENST00000367142 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
NUCKS1-201ENST00000367142 KIR2DL5BQ8NHK3 375 aa12.11□□□□□ -0.47
NUCKS1-201ENST00000367142 ANK1P16157 1881 aa12.11□□□□□ -0.47
NUCKS1-201ENST00000367142 PRB2P02812 416 aaPredicted RBP12.11□□□□□ -0.47
NUCKS1-201ENST00000367142 JMJD7-PLA2G4BH0Y9G9 81 aa12.1□□□□□ -0.47
NUCKS1-201ENST00000367142 HILS1P60008 231 aa12.1□□□□□ -0.47
NUCKS1-201ENST00000367142 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
NUCKS1-201ENST00000367142 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
NUCKS1-201ENST00000367142 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
NUCKS1-201ENST00000367142 CCL25O15444 150 aa12.09□□□□□ -0.47
NUCKS1-201ENST00000367142 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
NUCKS1-201ENST00000367142 TMEM61Q8N0U2 210 aa12.08□□□□□ -0.47
NUCKS1-201ENST00000367142 MPDZO75970 2070 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 PCP2Q8IVA1 136 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 COX7BP24311 80 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 IGKV1-17P01599 117 aa12.08□□□□□ -0.48
NUCKS1-201ENST00000367142 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
NUCKS1-201ENST00000367142 CEP290O15078 2479 aa12.07□□□□□ -0.48
NUCKS1-201ENST00000367142 TOMM6Q96B49 74 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 A4D1N5 150 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 A6NDX4 124 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 IGKV3D-7A0A0C4DH55 119 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 SIRPDQ9H106 197 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 LECT2O14960 151 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 DAND5Q8N907 189 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 MAP6D1Q9H9H5 199 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
NUCKS1-201ENST00000367142 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 RPL39P62891 51 aaKnown RBP12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 Q8N7P7 452 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms