RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 COLCA2A8K830 154 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 GYPEP15421 78 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 CCL18P55774 89 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 IGFL4Q6B9Z1 124 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 OR10G8Q8NGN5 311 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
MRPL55-209ENST00000366735 RYR1P21817 5038 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
MRPL55-209ENST00000366735 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
MRPL55-209ENST00000366735 ATP5G1P05496 136 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
MRPL55-209ENST00000366735 OR5I1Q13606 314 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 SAPCD1Q5SSQ6 148 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 AMTNQ6UX39 209 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 C9orf47Q6ZRZ4 202 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 PRNTQ86SH4 94 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 C6orf223Q8N319 242 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 ZNF738Q8NE65 137 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 C20orf173Q96LM9 149 aa8.74□□□□□ -1.01
MRPL55-209ENST00000366735 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 PRAC2D3DTV9 90 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 F5H768 121 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 M0R2Z0 102 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 NUDT3O95989 172 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 DEFB130BP0DP73 79 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 DEFB130AP0DP74 79 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
MRPL55-209ENST00000366735 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 ELOBQ15370 118 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 SGK494Q96LW2 274 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 VGLL1Q99990 258 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 V9GYV3 84 aa8.73□□□□□ -1.01
MRPL55-209ENST00000366735 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 ZNF705GA8MUZ8 300 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-209ENST00000366735 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
MRPL55-209ENST00000366735 OR10J6PQ8NGY7 276 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 PYGO2Q9BRQ0 406 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
MRPL55-209ENST00000366735 TRAV9-1A0A075B6T8 112 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 TRBV7-9A0A0J9YWB2 115 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 S100PP25815 95 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 ZNF138P52744 262 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-209ENST00000366735 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-209ENST00000366735 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 LINC01587Q99440 93 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
MRPL55-209ENST00000366735 IL36BQ9NZH7 164 aa8.71□□□□□ -1.02
MRPL55-209ENST00000366735 TIMM8BQ9Y5J9 83 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-209ENST00000366735 CBY3A6NI87 242 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 CRXO43186 299 aaPredicted RBP8.7□□□□□ -1.02
MRPL55-209ENST00000366735 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
MRPL55-209ENST00000366735 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 KCNIP4Q6PIL6 250 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 ZNF493Q6ZR52 646 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 OR8A1Q8NGG7 326 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 ZNRF2Q8NHG8 242 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
MRPL55-209ENST00000366735 TRAV12-2A0A075B6T6 113 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 RAB5AP20339 215 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 CDKN1BP46527 198 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 ERCC8Q13216 396 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 MAPKAPK5-AS1Q8N8E1 139 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
MRPL55-209ENST00000366735 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
MRPL55-209ENST00000366735 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
MRPL55-209ENST00000366735 URGCP-MRPS24S4R325 110 aa8.69□□□□□ -1.02
MRPL55-209ENST00000366735 ABCA13Q86UQ4 5058 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 P01737 135 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 TYMSP04818 313 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 CXCL1P09341 107 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 HTN1P15515 57 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 CRIP1P50238 77 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 SMUG1Q53HV7 270 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 Q8TAT8 98 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 FAM19A4Q96LR4 140 aa8.68□□□□□ -1.02
MRPL55-209ENST00000366735 C8orf49Q96NF6 230 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms