RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 OR1N2Q8NGR9 330 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 MAP1LC3AQ9H492 121 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 IGLV2-18A0A075B6J9 118 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 A6NDX4 124 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 H3BUA1 57 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 NDUFA4O00483 81 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 SOCS3O14543 225 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 TRBV12-3P01733 135 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
CLCN3-202ENST00000360642 HERV-K104P63124 156 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 C12orf54Q6X4T0 127 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 Q6ZQT7 251 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 C9orf139Q6ZV77 190 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 CCL25O15444 150 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 SNAI2O43623 268 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 Q8N1X5 172 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 CCL19Q99731 98 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 NXT2Q9NPJ8 142 aaKnown RBP5.5□□□□□ -1.53
CLCN3-202ENST00000360642 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLCN3-202ENST00000360642 FCER1GP30273 86 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 CACNG7P62955 275 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 PRR9Q5T870 116 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 USMG5Q96IX5 58 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 TAX1BP3O14907 124 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-202ENST00000360642 EVI2AP22794 236 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
CLCN3-202ENST00000360642 IGHV4-30-2A0A087WSY4 118 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 NRACQ8N912 160 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 FAM19A4Q96LR4 140 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 LINC00477Q96M19 166 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 ZANQ9Y493 2812 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 CSPG4Q6UVK1 2322 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 LEPP41159 167 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 Q8N8P6 123 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 H3BUX3 64 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 DEFB1P60022 68 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 BLCAPP62952 87 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 LY6EQ16553 131 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 OR2K2Q8NGT1 345 aa5.48□□□□□ -1.53
CLCN3-202ENST00000360642 OVOL1O14753 267 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 CD5LO43866 347 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 MSMBP08118 114 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 CACNA1AO00555 2505 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 USP9XQ93008 2570 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-202ENST00000360642 ATP5J2P56134 94 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 HHLA3Q9XRX5 114 aa5.47□□□□□ -1.53
CLCN3-202ENST00000360642 SIVA1O15304 175 aa5.46□□□□□ -1.53
CLCN3-202ENST00000360642 OR4X2Q8NGF9 303 aa5.46□□□□□ -1.53
CLCN3-202ENST00000360642 C18orf15Q96N68 181 aa5.46□□□□□ -1.53
CLCN3-202ENST00000360642 TRAV26-2A0A0B4J265 109 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 IGHV3-11P01762 117 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 SMIM15Q7Z3B0 74 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 TMEM158Q8WZ71 300 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 NRGNQ92686 78 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 ZNF580Q9UK33 172 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 EPG5Q9HCE0 2579 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 USP9YO00507 2555 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-202ENST00000360642 TRBV7-9A0A0J9YWB2 115 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 F8WDY8 70 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 H3BVH4 76 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 TMEM97Q5BJF2 176 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 SPANXN1Q5VSR9 72 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 ADAMTSL5Q6ZMM2 481 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 OR9G4Q8NGQ1 327 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 OR10J6PQ8NGY7 276 aa5.46□□□□□ -1.54
CLCN3-202ENST00000360642 DOPEY2Q9Y3R5 2298 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 IGKV3-7A0A075B6H7 116 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 TRAV21A0A0B4J279 112 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 SEC11AP67812 179 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 PSMG4Q5JS54 123 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 MRAP2Q96G30 205 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 A0A0G2JLM5 398 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 PAX4O43316 350 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 SMIM17P0DL12 118 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 LAGE3Q14657 143 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 RHPN1-AS1Q9BWJ2 59 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 UFC1Q9Y3C8 167 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 MYO18BQ8IUG5 2567 aa5.45□□□□□ -1.54
CLCN3-202ENST00000360642 B4DSR2 109 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 PCP2Q8IVA1 136 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 SMPXQ9UHP9 88 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 FAM208BQ5VWN6 2430 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 IGSF10Q6WRI0 2623 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 K7EMT4 169 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 K7EP13 123 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 ATP5LO75964 103 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.54
CLCN3-202ENST00000360642 DAZ1Q9NQZ3 744 aaKnown RBP5.44□□□□□ -1.54
CLCN3-202ENST00000360642 F6UB75 175 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 PRSS1P07477 247 aa5.44□□□□□ -1.54
CLCN3-202ENST00000360642 VAMP3Q15836 100 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms