RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 HOXA5P20719 270 aa13.49□□□□□ -0.25
HLA-DRB1-201ENST00000360004 CLLU1Q5K131 121 aa13.49□□□□□ -0.25
HLA-DRB1-201ENST00000360004 DNLZQ5SXM8 178 aa13.49□□□□□ -0.25
HLA-DRB1-201ENST00000360004 TPPP3Q9BW30 176 aa13.49□□□□□ -0.25
HLA-DRB1-201ENST00000360004 TENM2Q9NT68 2774 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 M0R381 172 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 CXCL1P09341 107 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 SLAQ13239 276 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 FAM74A3Q4VXF1 159 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 UBE2DNLQ8IWF7 75 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 ZFP82Q8N141 532 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 ZNF479Q96JC4 524 aa13.48□□□□□ -0.25
HLA-DRB1-201ENST00000360004 LCE6AA0A183 80 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 C19orf71A6NCJ1 209 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 PAX4O43316 350 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 SRSF3P84103 164 aaKnown RBP13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 PTH2Q96A98 100 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
HLA-DRB1-201ENST00000360004 A8MWV9 139 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 K7EN84 100 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 MED14OSP0DP75 135 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 ERVFC1-1P60608 527 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 IFITM2Q01629 132 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 SOHLH1Q5JUK2 328 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 SPANXN1Q5VSR9 72 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 NUDT10Q8NFP7 164 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 NUDT11Q96G61 164 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 RNASE7Q9H1E1 156 aaKnown RBP13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 PRO0255Q9UI72 69 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 HHLA3Q9XRX5 114 aa13.46□□□□□ -0.25
HLA-DRB1-201ENST00000360004 GATCO43716 136 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 P0DMU3 169 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 GZMBP10144 247 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 SSTP61278 116 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 LINC00476Q8WZB0 136 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 CSMD3Q7Z407 3707 aa13.45□□□□□ -0.26
HLA-DRB1-201ENST00000360004 IGHV3-73A0A0B4J1V6 119 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 RS1O15537 224 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 CIDEAO60543 219 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FHL2Q14192 279 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 CFAP126Q5VTH2 177 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FER1L6-AS1Q8NA97 138 aa13.44□□□□□ -0.26
HLA-DRB1-201ENST00000360004 MUC21A0A0G2JKD1 596 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 MUC21A0A140T8X8 626 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 C9JQL5 133 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 ADIRFQ15847 76 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 PIK3CD-AS1Q5SR53 167 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FAM74A4Q5TZK3 123 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 LGALS9CQ6DKI2 356 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 LINC01551Q86U37 167 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
HLA-DRB1-201ENST00000360004 POM121L12Q8N7R1 296 aa13.42□□□□□ -0.26
HLA-DRB1-201ENST00000360004 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
HLA-DRB1-201ENST00000360004 OR10AG1Q8NH19 301 aa13.42□□□□□ -0.26
HLA-DRB1-201ENST00000360004 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
HLA-DRB1-201ENST00000360004 ICOSQ9Y6W8 199 aa13.42□□□□□ -0.26
HLA-DRB1-201ENST00000360004 H3BNG1 76 aa13.41□□□□□ -0.26
HLA-DRB1-201ENST00000360004 RHODO00212 210 aa13.41□□□□□ -0.26
HLA-DRB1-201ENST00000360004 OR5AL1P0C617 328 aa13.41□□□□□ -0.26
HLA-DRB1-201ENST00000360004 CRYBA4P53673 196 aa13.41□□□□□ -0.26
HLA-DRB1-201ENST00000360004 A0A1W2PPQ1 181 aa13.4□□□□□ -0.26
HLA-DRB1-201ENST00000360004 SNAI2O43623 268 aa13.4□□□□□ -0.26
HLA-DRB1-201ENST00000360004 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
HLA-DRB1-201ENST00000360004 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
HLA-DRB1-201ENST00000360004 PRADC1Q9BSG0 188 aa13.4□□□□□ -0.26
HLA-DRB1-201ENST00000360004 A0A087WWL8 130 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 A8MWL6 223 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 F2Z2F3 143 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 GYPEP15421 78 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 CCL18P55774 89 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 CACNG7P62955 275 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 SFRP2Q96HF1 295 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 VSIG2Q96IQ7 327 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 JPT2Q9H910 190 aa13.39□□□□□ -0.27
HLA-DRB1-201ENST00000360004 MUC4Q99102 2169 aa13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 SRIP30626 198 aa13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 RPL23P62829 140 aaKnown RBP13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 MRPL23Q16540 153 aaKnown RBP13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 ZFP2Q6ZN57 461 aa13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 ZNF575Q86XF7 245 aa13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 BORCS7Q96B45 105 aa13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 SSBP4Q9BWG4 385 aaPredicted RBP13.38□□□□□ -0.27
HLA-DRB1-201ENST00000360004 IGLC6P0CF74 106 aa13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 GATA1P15976 413 aaPredicted RBP13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 RHOHQ15669 191 aa13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
HLA-DRB1-201ENST00000360004 A0A096LPF7 62 aa13.36□□□□□ -0.27
HLA-DRB1-201ENST00000360004 ZNF56Q15929 161 aa13.36□□□□□ -0.27
HLA-DRB1-201ENST00000360004 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
HLA-DRB1-201ENST00000360004 SAMD10Q9BYL1 202 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms