RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 K7ERU9 68 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 MED14OSP0DP75 135 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
RFX3-202ENST00000358730 EDN2P20800 178 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 TMEM95Q3KNT9 176 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 NHP2Q9NX24 153 aaKnown RBP6.48□□□□□ -1.37
RFX3-202ENST00000358730 MUC4Q99102 2169 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 FABP2P12104 132 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 SLC25A16P16260 332 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 CEND1Q8N111 149 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 CHTOPQ9Y3Y2 248 aaKnown RBP6.47□□□□□ -1.37
RFX3-202ENST00000358730 AGRNO00468 2067 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 SAMD5Q5TGI4 173 aa6.47□□□□□ -1.37
RFX3-202ENST00000358730 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.37
RFX3-202ENST00000358730 RNF223E7ERA6 249 aa6.46□□□□□ -1.37
RFX3-202ENST00000358730 K7EMI3 77 aa6.46□□□□□ -1.37
RFX3-202ENST00000358730 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.37
RFX3-202ENST00000358730 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.37
RFX3-202ENST00000358730 TRBV7-9A0A0J9YWB2 115 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 SAP30O75446 220 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 WFDC12Q8WWY7 111 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 CSTL1Q9H114 145 aa6.46□□□□□ -1.38
RFX3-202ENST00000358730 OR11H12B2RN74 326 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 AVPP01185 164 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 CFHR3Q02985 330 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 NEXN-AS1Q8NBZ9 246 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 OR11H1Q8NG94 326 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 OR11H2Q8NH07 326 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 KLLNB2CW77 178 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 ID1P41134 155 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 DOPEY1Q5JWR5 2465 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 FLNCQ14315 2725 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 NXPH4O95158 308 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 PPP1R17O96001 155 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 DCANP1Q8TF63 244 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 PHLDA1Q8WV24 401 aaPredicted RBP6.45□□□□□ -1.38
RFX3-202ENST00000358730 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 CRYBG3Q68DQ2 2970 aa6.45□□□□□ -1.38
RFX3-202ENST00000358730 B4DSR2 109 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 CD7P09564 240 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 USP9XQ93008 2570 aaPredicted RBP6.44□□□□□ -1.38
RFX3-202ENST00000358730 TRAV12-3A0A0B4J271 114 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 K7EMT4 169 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 TAL2Q16559 108 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 JPT2Q9H910 190 aa6.44□□□□□ -1.38
RFX3-202ENST00000358730 A0A087WWL8 130 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 IGHV4-59P01825 116 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 SAMD13Q5VXD3 122 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 DEFB104AQ8WTQ1 72 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 KIF25-AS1Q9Y6Z4 181 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 PRSS29PA6NIE9 313 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 DUSP14O95147 198 aaKnown RBP6.43□□□□□ -1.38
RFX3-202ENST00000358730 IGKV3-20P01619 116 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 PSMB8P28062 276 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 C10orf99Q6UWK7 81 aa6.43□□□□□ -1.38
RFX3-202ENST00000358730 F5H697 171 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 LINC00315P59091 139 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 SCGB2A2Q13296 93 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 POM121L12Q8N7R1 296 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 NRGNQ92686 78 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 TP53TG1Q9Y2A0 90 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 DOPEY2Q9Y3R5 2298 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 TRBV7-3A0A075B6L6 115 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 TRAV12-2A0A075B6T6 113 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 E9PLD3 99 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 C12orf74Q32Q52 190 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 ZNF479Q96JC4 524 aa6.42□□□□□ -1.38
RFX3-202ENST00000358730 PIEZO1Q92508 2521 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 IGHV4OR15-8A0A075B7B6 117 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 A0A087WW49 117 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 IGLL5B9A064 214 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
RFX3-202ENST00000358730 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
RFX3-202ENST00000358730 KIR2DL4Q99706 377 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 MYO18BQ8IUG5 2567 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 GATA3P23771 443 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 EMP1P54849 157 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 SNRPD3P62318 126 aaKnown RBP6.41□□□□□ -1.38
RFX3-202ENST00000358730 ZFP2Q6ZN57 461 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
RFX3-202ENST00000358730 USP9YO00507 2555 aaPredicted RBP6.4□□□□□ -1.38
RFX3-202ENST00000358730 ANKRD17O75179 2603 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms