RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 IGHV4-4A0A075B6R2 117 aa17.1■□□□□ 0.33
ALKAL1-201ENST00000358543 ARMS2P0C7Q2 107 aa17.1■□□□□ 0.33
ALKAL1-201ENST00000358543 MED14OSP0DP75 135 aa17.1■□□□□ 0.33
ALKAL1-201ENST00000358543 RPL19P84098 196 aaKnown RBP17.1■□□□□ 0.33
ALKAL1-201ENST00000358543 H3BVH4 76 aa17.09■□□□□ 0.33
ALKAL1-201ENST00000358543 P01737 135 aa17.09■□□□□ 0.33
ALKAL1-201ENST00000358543 HOXA5P20719 270 aa17.08■□□□□ 0.32
ALKAL1-201ENST00000358543 RPS20P60866 119 aaKnown RBP17.08■□□□□ 0.32
ALKAL1-201ENST00000358543 NUDT10Q8NFP7 164 aa17.08■□□□□ 0.32
ALKAL1-201ENST00000358543 NUDT11Q96G61 164 aa17.08■□□□□ 0.32
ALKAL1-201ENST00000358543 APLNQ9ULZ1 77 aa17.08■□□□□ 0.32
ALKAL1-201ENST00000358543 TRAV4A0A0B4J268 109 aa17.07■□□□□ 0.32
ALKAL1-201ENST00000358543 LINC01551Q86U37 167 aa17.07■□□□□ 0.32
ALKAL1-201ENST00000358543 OR2D3Q8NGH3 330 aa17.07■□□□□ 0.32
ALKAL1-201ENST00000358543 SSBP4Q9BWG4 385 aaPredicted RBP17.07■□□□□ 0.32
ALKAL1-201ENST00000358543 TMEM88Q6PEY1 159 aa17.06■□□□□ 0.32
ALKAL1-201ENST00000358543 FAM231DQ6ZW35 169 aa17.06■□□□□ 0.32
ALKAL1-201ENST00000358543 POM121L12Q8N7R1 296 aa17.06■□□□□ 0.32
ALKAL1-201ENST00000358543 PHLDA3Q9Y5J5 127 aa17.06■□□□□ 0.32
ALKAL1-201ENST00000358543 XKRY2A2RUG3 117 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 CIDEAO60543 219 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 TMEM241Q24JQ0 296 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 SOHLH1Q5JUK2 328 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 SYT8Q8NBV8 401 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 OR4C5Q8NGB2 326 aa17.05■□□□□ 0.32
ALKAL1-201ENST00000358543 RS1O15537 224 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 SNAI2O43623 268 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 OR5AL1P0C617 328 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 SLAQ13239 276 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 ZNF479Q96JC4 524 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 RNASE7Q9H1E1 156 aaKnown RBP17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 LYSTQ99698 3801 aa17.04■□□□□ 0.32
ALKAL1-201ENST00000358543 IGHV3-53P01767 116 aa17.03■□□□□ 0.32
ALKAL1-201ENST00000358543 FHL2Q14192 279 aa17.03■□□□□ 0.32
ALKAL1-201ENST00000358543 DMRTA1Q5VZB9 504 aa17.03■□□□□ 0.32
ALKAL1-201ENST00000358543 C15orf53Q8NAA6 179 aa17.03■□□□□ 0.32
ALKAL1-201ENST00000358543 NAT8Q9UHE5 227 aa17.03■□□□□ 0.32
ALKAL1-201ENST00000358543 A8MWV9 139 aa17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 H3BNG1 76 aa17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 SFTA3P0C7M3 94 aa17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 CFAP126Q5VTH2 177 aa17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 ZFP82Q8N141 532 aa17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 RPP21Q9H633 154 aaKnown RBP17.02■□□□□ 0.32
ALKAL1-201ENST00000358543 TRAV26-1A0A087WT03 109 aa17.01■□□□□ 0.31
ALKAL1-201ENST00000358543 IGLC6P0CF74 106 aa17.01■□□□□ 0.31
ALKAL1-201ENST00000358543 KMT2CQ8NEZ4 4911 aaKnown RBP17.01■□□□□ 0.31
ALKAL1-201ENST00000358543 ERVFC1-1P60608 527 aa17■□□□□ 0.31
ALKAL1-201ENST00000358543 UQCC3Q6UW78 93 aa17■□□□□ 0.31
ALKAL1-201ENST00000358543 PRO0255Q9UI72 69 aa17■□□□□ 0.31
ALKAL1-201ENST00000358543 HHLA3Q9XRX5 114 aa17■□□□□ 0.31
ALKAL1-201ENST00000358543 TRGV4A0A0C4DH28 118 aa16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 A0A1W2PPQ1 181 aa16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 GATCO43716 136 aaKnown RBP16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 NXPH4O95158 308 aa16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 GZMBP10144 247 aa16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 RPL23P62829 140 aaKnown RBP16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 OSTCQ9NRP0 149 aa16.99■□□□□ 0.31
ALKAL1-201ENST00000358543 NACAE9PAV3 2078 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 ALMS1Q8TCU4 4167 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 F2Z2F3 143 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 M0R381 172 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 CRYBA4P53673 196 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 CT83Q5H943 113 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 ZFP2Q6ZN57 461 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 FER1L6-AS1Q8NA97 138 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 OR10AG1Q8NH19 301 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 ISOC2Q96AB3 205 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 SFRP2Q96HF1 295 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 VSIG2Q96IQ7 327 aa16.98■□□□□ 0.31
ALKAL1-201ENST00000358543 LGALS9CQ6DKI2 356 aa16.97■□□□□ 0.31
ALKAL1-201ENST00000358543 DNAH1Q9P2D7 4330 aa16.96■□□□□ 0.31
ALKAL1-201ENST00000358543 A0A0J9YY99 117 aa16.96■□□□□ 0.31
ALKAL1-201ENST00000358543 LCE6AA0A183 80 aa16.96■□□□□ 0.31
ALKAL1-201ENST00000358543 PAX4O43316 350 aa16.96■□□□□ 0.31
ALKAL1-201ENST00000358543 SPANXN1Q5VSR9 72 aa16.96■□□□□ 0.31
ALKAL1-201ENST00000358543 A8MWL6 223 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 ADIRFQ15847 76 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 UFSP1Q6NVU6 142 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 LINC00476Q8WZB0 136 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 JPT2Q9H910 190 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 SACSQ9NZJ4 4579 aa16.95■□□□□ 0.3
ALKAL1-201ENST00000358543 LINC00862A6NCI5 91 aa16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 NUDT3O95989 172 aa16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 GATA1P15976 413 aaPredicted RBP16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 CACNG7P62955 275 aa16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 WDR73Q6P4I2 378 aa16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 C15orf54Q8N8G6 183 aa16.94■□□□□ 0.3
ALKAL1-201ENST00000358543 RHODO00212 210 aa16.93■□□□□ 0.3
ALKAL1-201ENST00000358543 TPPP3Q9BW30 176 aa16.93■□□□□ 0.3
ALKAL1-201ENST00000358543 TRBV6-4A0A1B0GX49 114 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 CRYGDP07320 174 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 P0DMU3 169 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 FAM231AP0DMU4 169 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 FAM231CP0DMU5 169 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 CTRLP40313 264 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 FOXA3P55318 350 aaPredicted RBP16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 LYZL1Q6UWQ5 148 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 COMMD7Q86VX2 200 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 GTSF1Q8WW33 167 aa16.92■□□□□ 0.3
ALKAL1-201ENST00000358543 SAMD10Q9BYL1 202 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms