RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 PRB1P04280 392 aa11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 LGALS1P09382 135 aaKnown RBP11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 DAZAP2Q15038 168 aaPredicted RBP11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
SLC6A20-202ENST00000358525 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 K7EP34 96 aa11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 LEPROTO15243 131 aa11.32□□□□□ -0.6
SLC6A20-202ENST00000358525 SIVA1O15304 175 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 A0A1W2PPM0 123 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 SLC25A20O43772 301 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 DEFB1P60022 68 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 SLURP1P55000 103 aa11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 LINC00322Q6ZN03 302 aaPredicted RBP11.31□□□□□ -0.6
SLC6A20-202ENST00000358525 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
SLC6A20-202ENST00000358525 OTOGLQ3ZCN5 2332 aa11.3□□□□□ -0.6
SLC6A20-202ENST00000358525 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
SLC6A20-202ENST00000358525 J3QQQ9 107 aa11.3□□□□□ -0.6
SLC6A20-202ENST00000358525 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 K7EP13 123 aa11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 SS18Q15532 418 aa11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
SLC6A20-202ENST00000358525 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 TNCP24821 2201 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 SRSF2Q01130 221 aaKnown RBP11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 TRBV12-3P01733 135 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 TAL2Q16559 108 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 ZNF48Q96MX3 618 aaPredicted RBP11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 JPT2Q9H910 190 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 CENPFP49454 3210 aa11.28□□□□□ -0.6
SLC6A20-202ENST00000358525 SPINK8P0C7L1 97 aa11.27□□□□□ -0.6
SLC6A20-202ENST00000358525 GAGE6Q13070 117 aa11.27□□□□□ -0.6
SLC6A20-202ENST00000358525 ETDBQ3ZM63 59 aa11.27□□□□□ -0.6
SLC6A20-202ENST00000358525 UTRNP46939 3433 aa11.27□□□□□ -0.6
SLC6A20-202ENST00000358525 CTRLP40313 264 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 UNQ9165/PRO28630Q6UXU0 137 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 TMEM243Q9BU79 118 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 GAGE2BQ13066 116 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 GAGE2EQ4V326 116 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 GDF5OSQ5U4N7 250 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 GAGE2DQ9UEU5 116 aa11.27□□□□□ -0.61
SLC6A20-202ENST00000358525 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 K7EMI3 77 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 H3BMG7 143 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 DEFB113Q30KQ7 82 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 U3KQE9 123 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
SLC6A20-202ENST00000358525 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 A0A087WW49 117 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 RHOHQ15669 191 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 ZFAND6Q6FIF0 208 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 FGF6P10767 208 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 PRO1854Q9UHT4 67 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 IGHG2P01859 326 aa11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 ZNF80P51504 273 aaPredicted RBP11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 TNRC6AQ8NDV7 1962 aaKnown RBP11.25□□□□□ -0.61
SLC6A20-202ENST00000358525 CRYGBP07316 175 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 PFN2P35080 140 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 F8W1H4 67 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 LMO4P61968 165 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 CCL24O00175 119 aa11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
SLC6A20-202ENST00000358525 F5H768 121 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 CCL25O15444 150 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 DAD1P61803 113 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 KIAA1549Q9HCM3 1950 aa11.23□□□□□ -0.61
SLC6A20-202ENST00000358525 J3QKU1 62 aa11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 Q8N1Y9 231 aa11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 A0A096LPF7 62 aa11.22□□□□□ -0.61
SLC6A20-202ENST00000358525 C2orf70A6NJV1 201 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms