RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PCDH15Q96QU1 1955 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 H3BRN7 92 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 WDR90Q96KV7 1748 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 GP9P14770 177 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 TMEM61Q8N0U2 210 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 ADCYAP1P18509 176 aa8.33□□□□□ -1.08
FXR1-202ENST00000357559 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 ZNF493Q6ZR52 646 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 MUC4Q99102 2169 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 SH2D6Q7Z4S9 175 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 KIAA1671Q9BY89 1806 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 LMO1P25800 156 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 RBAKDNA6NC62 111 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 NRGNQ92686 78 aa8.32□□□□□ -1.08
FXR1-202ENST00000357559 IGKV2-24A0A0C4DH68 120 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 K7EQD1 137 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 C17orf58Q2M2W7 97 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 PRSS47A8MTI9 375 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 PLXNA2O75051 1894 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 IGKV1-6A0A0C4DH72 117 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
FXR1-202ENST00000357559 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 C9orf66Q5T8R8 295 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 ZNF492Q9P255 531 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 WNK1Q9H4A3 2382 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 YPEL3P61236 119 aaPredicted RBP8.3□□□□□ -1.08
FXR1-202ENST00000357559 V9GYV3 84 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 LYPD6Q86Y78 171 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 GPHB5Q86YW7 130 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 IGLC7A0M8Q6 106 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 Q0VG73 95 aa8.3□□□□□ -1.08
FXR1-202ENST00000357559 LTAP01374 205 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 DEFB135Q30KP9 77 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PLXNB1O43157 2135 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 B3GALT5-AS1P59052 145 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 C9JQL5 133 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 LGALS9BQ3B8N2 356 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 LGALS9CQ6DKI2 356 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 FAM110AQ9BQ89 295 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 CFC1P0CG37 223 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 K7ENP7 123 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PRR20EP86478 221 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PRR20CP86479 221 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PRR20DP86480 221 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PRR20BP86481 221 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PRR20AP86496 221 aa8.29□□□□□ -1.08
FXR1-202ENST00000357559 PLXNA4Q9HCM2 1894 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 SPART-AS1P0CW21 52 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 SIPA1L1O43166 1804 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 WT1-ASQ06250 92 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 HRCT1Q6UXD1 115 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 FNDC10F2Z333 226 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 QRFPP83859 136 aa8.28□□□□□ -1.08
FXR1-202ENST00000357559 IGHV4-38-2P0DP08 117 aa8.27□□□□□ -1.08
FXR1-202ENST00000357559 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.08
FXR1-202ENST00000357559 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.08
FXR1-202ENST00000357559 DENND4CQ5VZ89 1909 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 Q6ZS92 163 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
FXR1-202ENST00000357559 ZNF726P1Q15940 193 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 KLK12Q9UKR0 248 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 ARHGAP32A7KAX9 2087 aa8.27□□□□□ -1.09
FXR1-202ENST00000357559 OPRPNQ99935 248 aaPredicted RBP8.27□□□□□ -1.09
FXR1-202ENST00000357559 TMEM190Q8WZ59 177 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 RPL39P62891 51 aaKnown RBP8.26□□□□□ -1.09
FXR1-202ENST00000357559 LYPD6BQ8NI32 183 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 K7EN84 100 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 WI2-2373I1.2A0A1W2PRP0 233 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 J3QLI3 93 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 FOXI1Q12951 378 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 HCFC1P51610 2035 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 TRBV6-6A0A0A6YYG2 114 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 A0A0B4J2C4 111 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 IGHV4-30-4P0DP06 118 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 CFPP27918 469 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 WFDC10BQ8IUB3 73 aa8.26□□□□□ -1.09
FXR1-202ENST00000357559 HERV-K104P63124 156 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 Q6ZR03 302 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
FXR1-202ENST00000357559 TET2Q6N021 2002 aaPredicted RBP8.25□□□□□ -1.09
FXR1-202ENST00000357559 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms