RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PPDPFLQ8WWR9 84 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 HHLA3Q9XRX5 114 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 DLEU1O43261 78 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 PTPRBP23467 1997 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
COL27A1-201ENST00000356083 NDUFS7O75251 213 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 RNF144BQ7Z419 303 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 ATP6V0E2Q8NHE4 81 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 MUSTN1Q8IVN3 82 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
COL27A1-201ENST00000356083 A0A0G2JMZ2 1700 aa13.65□□□□□ -0.22
COL27A1-201ENST00000356083 LRRC37A2A6NM11 1700 aa13.65□□□□□ -0.22
COL27A1-201ENST00000356083 DAND5Q8N907 189 aa13.65□□□□□ -0.22
COL27A1-201ENST00000356083 KLHDC3Q9BQ90 382 aa13.65□□□□□ -0.23
COL27A1-201ENST00000356083 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 SIGLEC8Q9NYZ4 499 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 TMEM14EPQ6UXP3 125 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 LOC105371267A0A1B0GV96 52 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 WISP1O95388 367 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 NUP210Q8TEM1 1887 aaPredicted RBP13.64□□□□□ -0.23
COL27A1-201ENST00000356083 IGLV3-32A0A0A0MS00 114 aa13.64□□□□□ -0.23
COL27A1-201ENST00000356083 C9orf118A6NHY6 69 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 MPZP25189 248 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR20EP86478 221 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR20CP86479 221 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR20DP86480 221 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR20BP86481 221 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR20AP86496 221 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 ZFP2Q6ZN57 461 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 F8VRH5 84 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 DEFB113Q30KQ7 82 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PRR25Q96S07 402 aa13.63□□□□□ -0.23
COL27A1-201ENST00000356083 PYGO2Q9BRQ0 406 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 K7ERS5 55 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 ZC2HC1AQ96GY0 325 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 GFRA4Q9GZZ7 299 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 BTCP35070 178 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 LTAP01374 205 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 VOPP1Q96AW1 172 aa13.62□□□□□ -0.23
COL27A1-201ENST00000356083 B9D2Q9BPU9 175 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 TRBV19A0A075B6N1 114 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
COL27A1-201ENST00000356083 PSMB8P28062 276 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 F8W1H4 67 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 ZNF664Q8N3J9 261 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 DKK2Q9UBU2 259 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
COL27A1-201ENST00000356083 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 IGLC2P0DOY2 106 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 IGLC3P0DOY3 106 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 IGLV3-9A0A075B6K5 115 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 LYPD6BQ8NI32 183 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 C16orf74Q96GX8 76 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 Q6ZRM9 215 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 RPL39LQ96EH5 51 aaKnown RBP13.6□□□□□ -0.23
COL27A1-201ENST00000356083 CSRP3P50461 194 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 Q6ZWC4 215 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-201ENST00000356083 NDUFA4L2Q9NRX3 87 aa13.6□□□□□ -0.23
COL27A1-201ENST00000356083 BRK1Q8WUW1 75 aa13.59□□□□□ -0.23
COL27A1-201ENST00000356083 KLF2Q9Y5W3 355 aaPredicted RBP13.59□□□□□ -0.23
COL27A1-201ENST00000356083 OPRPNQ99935 248 aaPredicted RBP13.59□□□□□ -0.23
COL27A1-201ENST00000356083 HOXB4P17483 251 aaPredicted RBP13.59□□□□□ -0.23
COL27A1-201ENST00000356083 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
COL27A1-201ENST00000356083 HIGD2AQ9BW72 106 aa13.59□□□□□ -0.23
COL27A1-201ENST00000356083 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.23
COL27A1-201ENST00000356083 NDUFC2O95298 119 aa13.58□□□□□ -0.23
COL27A1-201ENST00000356083 C2CD3Q4AC94 2353 aa13.58□□□□□ -0.23
COL27A1-201ENST00000356083 A0A087WZ39 114 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 HRCT1Q6UXD1 115 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 ATP5G1P05496 136 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-201ENST00000356083 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
COL27A1-201ENST00000356083 K7EQD1 137 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 SS18L2Q9UHA2 77 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 RETNQ9HD89 108 aa13.58□□□□□ -0.24
COL27A1-201ENST00000356083 IGHV4-38-2P0DP08 117 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 MYO9AB2RTY4 2548 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 RBAKDNA6NC62 111 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 Q8NFD4 153 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 TMEM61Q8N0U2 210 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 NDUFA1O15239 70 aa13.57□□□□□ -0.24
COL27A1-201ENST00000356083 NPYP01303 97 aa13.56□□□□□ -0.24
COL27A1-201ENST00000356083 C3orf22Q8N5N4 141 aa13.56□□□□□ -0.24
COL27A1-201ENST00000356083 A0A1W2PPM0 123 aa13.56□□□□□ -0.24
COL27A1-201ENST00000356083 IGKV2D-26A0A0A0MRZ7 120 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms